Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.78□□□□□ -1.64
CX3CL1P78423 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.78□□□□□ -1.64
CX3CL1P78423 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC025918.2-201ENST00000558683 763 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 RPL12P48-201ENST00000605620 304 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AL136097.3-201ENST00000611097 505 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AP000943.4-201ENST00000622912 357 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AL357562.1-201ENST00000624911 609 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC073488.3-201ENST00000631611 778 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CX3CL1P78423 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CX3CL1P78423 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CX3CL1P78423 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC104966.1-201ENST00000467010 1464 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 RNU1-65P-201ENST00000363919 148 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 SNORA51.9-201ENST00000384295 124 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 MYL6P5-201ENST00000412707 459 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 DPPA2P2-201ENST00000418220 897 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 NMD3P2-201ENST00000421815 761 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 RPL23AP4-201ENST00000427757 463 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC073410.1-201ENST00000435125 589 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 CUBNP2-201ENST00000443534 1139 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 ACA64.4-201ENST00000459070 127 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AC098847.1-201ENST00000473094 348 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 RN7SL649P-201ENST00000496974 275 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL158068.1-201ENST00000506116 616 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 PRMT5P1-201ENST00000514351 598 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 RN7SKP35-201ENST00000517210 151 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 SOX5P1-201ENST00000524155 1127 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC002310.3-201ENST00000569728 723 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC068768.2-201ENST00000602352 343 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 LSM1P2-201ENST00000604911 322 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL139022.2-201ENST00000606934 443 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL135786.2-201ENST00000608422 615 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AP001033.2-201ENST00000609701 1003 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC004801.6-201ENST00000616571 978 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CX3CL1P78423 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CL1P78423 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CL1P78423 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 AC239868.2-201ENST00000564237 4527 ntBASIC4.77□□□□□ -1.65
CX3CL1P78423 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CL1P78423 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms