Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 RNU6-31P-201ENST00000384388 108 ntBASIC5.59□□□□□ -1.51
RAE1P78406 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 MIR1275-201ENST00000408770 80 ntBASIC5.59□□□□□ -1.51
RAE1P78406 RPL26P37-201ENST00000411983 438 ntBASIC5.59□□□□□ -1.51
RAE1P78406 UBE2V1P9-201ENST00000414760 368 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AC115285.1-201ENST00000424879 736 ntBASIC5.59□□□□□ -1.51
RAE1P78406 FO393414.1-201ENST00000428697 1184 ntBASIC5.59□□□□□ -1.51
RAE1P78406 MTCO1P43-201ENST00000431831 488 ntBASIC5.59□□□□□ -1.51
RAE1P78406 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.59□□□□□ -1.51
RAE1P78406 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.59□□□□□ -1.51
RAE1P78406 TIMM8BP2-201ENST00000445940 251 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AC005077.1-201ENST00000449226 375 ntBASIC5.59□□□□□ -1.51
RAE1P78406 RPL7P61-201ENST00000451721 751 ntBASIC5.59□□□□□ -1.51
RAE1P78406 GEMIN2P1-201ENST00000454246 752 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AC104339.1-201ENST00000465478 348 ntBASIC5.59□□□□□ -1.51
RAE1P78406 RPL21P18-201ENST00000469899 480 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AC092865.4-201ENST00000477936 615 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AC068587.2-201ENST00000478386 781 ntBASIC5.59□□□□□ -1.51
RAE1P78406 RPL21P47-201ENST00000483696 477 ntBASIC5.59□□□□□ -1.51
RAE1P78406 RPL9P15-201ENST00000491096 532 ntBASIC5.59□□□□□ -1.51
RAE1P78406 SUMO2P5-201ENST00000506790 245 ntBASIC5.59□□□□□ -1.51
RAE1P78406 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.59□□□□□ -1.51
RAE1P78406 RN7SKP265-201ENST00000516448 223 ntBASIC5.59□□□□□ -1.51
RAE1P78406 HAUS1P3-201ENST00000523909 662 ntBASIC5.59□□□□□ -1.51
RAE1P78406 NPM1P35-201ENST00000533043 868 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.59□□□□□ -1.51
RAE1P78406 AL121594.2-201ENST00000541658 472 ntBASIC5.59□□□□□ -1.51
RAE1P78406 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.59□□□□□ -1.51
RAE1P78406 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.59□□□□□ -1.51
RAE1P78406 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.59□□□□□ -1.51
RAE1P78406 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.59□□□□□ -1.51
RAE1P78406 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RAE1P78406 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.59□□□□□ -1.51
RAE1P78406 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.59□□□□□ -1.51
RAE1P78406 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.59□□□□□ -1.51
RAE1P78406 MTCO2P2-201ENST00000591258 225 ntBASIC5.59□□□□□ -1.51
RAE1P78406 BNIP3P32-201ENST00000600015 554 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AL606834.3-201ENST00000602615 496 ntBASIC5.59□□□□□ -1.51
RAE1P78406 RPP40P2-201ENST00000603596 712 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AC145423.1-201ENST00000605712 336 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AL133481.2-203ENST00000607558 139 ntBASIC5.59□□□□□ -1.51
RAE1P78406 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 AL078595.3-201ENST00000623815 1166 ntBASIC5.59□□□□□ -1.51
RAE1P78406 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.59□□□□□ -1.51
RAE1P78406 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.59□□□□□ -1.51
RAE1P78406 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.59□□□□□ -1.51
RAE1P78406 AC006927.2-201ENST00000639256 389 ntBASIC5.59□□□□□ -1.51
RAE1P78406 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.59□□□□□ -1.51
RAE1P78406 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.59□□□□□ -1.51
RAE1P78406 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.59□□□□□ -1.51
RAE1P78406 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.59□□□□□ -1.51
RAE1P78406 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
RAE1P78406 AC138907.8-201ENST00000623981 2256 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AL355834.1-201ENST00000556602 3965 ntBASIC5.59□□□□□ -1.51
RAE1P78406 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RAE1P78406 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
RAE1P78406 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.59□□□□□ -1.52
RAE1P78406 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.52
RAE1P78406 QRSL1P1-201ENST00000400977 1540 ntBASIC5.58□□□□□ -1.52
RAE1P78406 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
RAE1P78406 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RAE1P78406 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.58□□□□□ -1.52
RAE1P78406 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RAE1P78406 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.58□□□□□ -1.52
RAE1P78406 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.58□□□□□ -1.52
RAE1P78406 CRIP1P1-201ENST00000427567 185 ntBASIC5.58□□□□□ -1.52
RAE1P78406 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.58□□□□□ -1.52
RAE1P78406 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.58□□□□□ -1.52
RAE1P78406 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.58□□□□□ -1.52
RAE1P78406 RPS7P2-201ENST00000435134 607 ntBASIC5.58□□□□□ -1.52
RAE1P78406 EEF1B2P3-201ENST00000447718 678 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 MTND6P5-201ENST00000448266 512 ntBASIC5.58□□□□□ -1.52
RAE1P78406 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.58□□□□□ -1.52
RAE1P78406 YRDCP3-201ENST00000456507 480 ntBASIC5.58□□□□□ -1.52
RAE1P78406 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.58□□□□□ -1.52
RAE1P78406 AC116562.1-201ENST00000485355 781 ntBASIC5.58□□□□□ -1.52
RAE1P78406 EIF1P7-201ENST00000487533 337 ntBASIC5.58□□□□□ -1.52
RAE1P78406 TPT1P3-201ENST00000492841 512 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AL117692.1-201ENST00000494283 713 ntBASIC5.58□□□□□ -1.52
RAE1P78406 ASNSP4-201ENST00000511103 447 ntBASIC5.58□□□□□ -1.52
RAE1P78406 PRMT5P1-201ENST00000514351 598 ntBASIC5.58□□□□□ -1.52
RAE1P78406 RN7SKP238-201ENST00000516483 249 ntBASIC5.58□□□□□ -1.52
RAE1P78406 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms