Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNA5SP340-201ENST00000517132 107 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM4P67936 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM4P67936 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.04□□□□□ -1.44
TPM4P67936 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM4P67936 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.04□□□□□ -1.44
TPM4P67936 AP005403.1-201ENST00000579720 229 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM4P67936 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.04□□□□□ -1.44
TPM4P67936 AC006272.2-201ENST00000594725 163 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.04□□□□□ -1.44
TPM4P67936 AC009027.1-201ENST00000604510 479 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AC091167.5-201ENST00000605689 894 ntBASIC6.04□□□□□ -1.44
TPM4P67936 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.04□□□□□ -1.44
TPM4P67936 AC099654.6-201ENST00000636487 512 ntBASIC6.04□□□□□ -1.44
TPM4P67936 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.04□□□□□ -1.44
TPM4P67936 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TPM4P67936 AL450345.1-202ENST00000605741 3881 ntBASIC6.04□□□□□ -1.44
TPM4P67936 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM4P67936 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
TPM4P67936 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TPM4P67936 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TPM4P67936 COX6B1P3-201ENST00000312310 260 ntBASIC6.03□□□□□ -1.44
TPM4P67936 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 RN7SKP184-201ENST00000362348 333 ntBASIC6.03□□□□□ -1.44
TPM4P67936 SNORA64.1-201ENST00000362600 132 ntBASIC6.03□□□□□ -1.44
TPM4P67936 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.03□□□□□ -1.44
TPM4P67936 RPL12P17-201ENST00000432393 498 ntBASIC6.03□□□□□ -1.44
TPM4P67936 HMGB3P24-201ENST00000433260 622 ntBASIC6.03□□□□□ -1.44
TPM4P67936 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM4P67936 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM4P67936 CEACAMP11-201ENST00000455211 583 ntBASIC6.03□□□□□ -1.44
TPM4P67936 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TPM4P67936 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TPM4P67936 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM4P67936 RBBP4P1-201ENST00000502424 1276 ntBASIC6.03□□□□□ -1.44
TPM4P67936 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.03□□□□□ -1.44
TPM4P67936 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM4P67936 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM4P67936 HMGB1P42-201ENST00000532126 553 ntBASIC6.03□□□□□ -1.44
TPM4P67936 OR8G3P-201ENST00000533406 921 ntBASIC6.03□□□□□ -1.44
TPM4P67936 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM4P67936 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.03□□□□□ -1.44
TPM4P67936 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 AP005431.1-201ENST00000618479 319 ntBASIC6.03□□□□□ -1.44
TPM4P67936 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.03□□□□□ -1.44
TPM4P67936 AC024884.1-201ENST00000620583 399 ntBASIC6.03□□□□□ -1.44
TPM4P67936 ICE2P1-201ENST00000512800 1849 ntBASIC6.03□□□□□ -1.44
TPM4P67936 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.03□□□□□ -1.44
TPM4P67936 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM4P67936 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.03□□□□□ -1.44
TPM4P67936 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 LINC01963-201ENST00000562038 3148 ntBASIC6.02□□□□□ -1.45
TPM4P67936 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM4P67936 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TPM4P67936 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TPM4P67936 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TPM4P67936 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 RN7SKP86-201ENST00000410454 332 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.02□□□□□ -1.45
TPM4P67936 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM4P67936 AC124944.2-201ENST00000429866 1242 ntBASIC6.02□□□□□ -1.45
TPM4P67936 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 NDUFS5P5-201ENST00000437256 321 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AC073909.1-201ENST00000447112 999 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM4P67936 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM4P67936 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.02□□□□□ -1.45
TPM4P67936 RN7SL568P-201ENST00000493069 298 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AC106822.1-201ENST00000502647 526 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM4P67936 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.02□□□□□ -1.45
TPM4P67936 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM4P67936 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM4P67936 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM4P67936 OR11H3P-201ENST00000554547 982 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.02□□□□□ -1.45
TPM4P67936 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM4P67936 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM4P67936 AC011500.1-201ENST00000601963 469 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AC005899.6-201ENST00000620729 297 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AC135068.5-201ENST00000624197 983 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM4P67936 AP001052.1-201ENST00000626421 99 ntBASIC6.02□□□□□ -1.45
TPM4P67936 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM4P67936 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
TPM4P67936 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms