Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 NIFKP3-201ENST00000417799 865 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 AC019205.1-201ENST00000421830 730 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.86□□□□□ -1.31
RHBDL3P58872 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.86□□□□□ -1.31
RHBDL3P58872 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.86□□□□□ -1.31
RHBDL3P58872 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.86□□□□□ -1.31
RHBDL3P58872 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.86□□□□□ -1.31
RHBDL3P58872 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.86□□□□□ -1.31
RHBDL3P58872 RPL35AP19-201ENST00000469425 329 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.86□□□□□ -1.31
RHBDL3P58872 UBA52P7-201ENST00000486088 380 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 RPL37AP8-201ENST00000494116 276 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.86□□□□□ -1.31
RHBDL3P58872 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.86□□□□□ -1.31
RHBDL3P58872 AC027308.1-201ENST00000517993 110 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.86□□□□□ -1.31
RHBDL3P58872 OR4A6P-201ENST00000534364 970 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.86□□□□□ -1.31
RHBDL3P58872 AC126615.2-201ENST00000553003 515 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 OR7E18P-201ENST00000592589 702 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 AC242628.1-201ENST00000606810 391 ntBASIC6.86□□□□□ -1.31
RHBDL3P58872 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.86□□□□□ -1.31
RHBDL3P58872 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RHBDL3P58872 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RHBDL3P58872 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RHBDL3P58872 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
RHBDL3P58872 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.86□□□□□ -1.31
RHBDL3P58872 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RHBDL3P58872 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.86□□□□□ -1.31
RHBDL3P58872 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RHBDL3P58872 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RHBDL3P58872 RNA5SP30-201ENST00000365552 115 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.85□□□□□ -1.31
RHBDL3P58872 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.85□□□□□ -1.31
RHBDL3P58872 AL360271.1-201ENST00000395679 510 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 RPL5P19-201ENST00000404228 893 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.85□□□□□ -1.31
RHBDL3P58872 NPM1P4-201ENST00000414095 812 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.85□□□□□ -1.31
RHBDL3P58872 RPA2P2-201ENST00000419698 796 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 MTND4P24-201ENST00000424002 397 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.85□□□□□ -1.31
RHBDL3P58872 LYPLA1P1-201ENST00000434514 622 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AC096775.1-201ENST00000437724 448 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 RPL17P2-201ENST00000491913 451 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.85□□□□□ -1.31
RHBDL3P58872 NRBF2P4-201ENST00000520874 850 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.85□□□□□ -1.31
RHBDL3P58872 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 EIF4A2P5-201ENST00000529914 499 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.85□□□□□ -1.31
RHBDL3P58872 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 AC090424.1-201ENST00000535243 736 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RHBDL3P58872 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.85□□□□□ -1.31
RHBDL3P58872 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.85□□□□□ -1.31
RHBDL3P58872 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.85□□□□□ -1.31
RHBDL3P58872 AL035661.1-201ENST00000620459 1144 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AC020923.1-201ENST00000624021 917 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.85□□□□□ -1.31
RHBDL3P58872 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 MFSD8-239ENST00000641590 2479 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
RHBDL3P58872 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RHBDL3P58872 AC005224.3-201ENST00000584683 2140 ntBASIC6.85□□□□□ -1.31
RHBDL3P58872 AL606537.1-201ENST00000607258 2011 ntBASIC6.84□□□□□ -1.31
RHBDL3P58872 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RHBDL3P58872 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RHBDL3P58872 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RHBDL3P58872 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RHBDL3P58872 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RHBDL3P58872 AC235565.1-201ENST00000456962 1325 ntBASIC6.84□□□□□ -1.31
RHBDL3P58872 AC117409.1-201ENST00000470499 1310 ntBASIC6.84□□□□□ -1.31
RHBDL3P58872 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RHBDL3P58872 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
RHBDL3P58872 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RHBDL3P58872 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RHBDL3P58872 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RHBDL3P58872 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms