Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC091965.5-201ENST00000624785 342 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.67□□□□□ -1.34
EPHB3P54753 AL355480.1-201ENST00000629041 99 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC061975.7-201ENST00000592016 2692 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC009120.2-204ENST00000621548 2032 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 LPAL2-203ENST00000454031 2498 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
EPHB3P54753 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
EPHB3P54753 SNORD113-6-201ENST00000363345 75 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 RNA5SP346-201ENST00000363541 121 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 AL050335.1-201ENST00000396909 869 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 RPS26P4-201ENST00000431743 355 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 AL389925.1-201ENST00000432257 728 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC013410.1-201ENST00000436223 1232 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 CBX1P5-201ENST00000475330 559 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 SNORA58-201ENST00000505219 137 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 OR7E99P-201ENST00000505750 922 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC010343.2-201ENST00000510162 224 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 RN7SKP35-201ENST00000517210 151 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.66□□□□□ -1.34
EPHB3P54753 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC007115.1-201ENST00000546853 234 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.66□□□□□ -1.34
EPHB3P54753 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 MIR4701-201ENST00000583094 63 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 VN1R88P-201ENST00000596787 292 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 AP000403.1-201ENST00000603349 851 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 DPRXP5-201ENST00000604662 539 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 AL008636.1-201ENST00000625038 1018 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 FRG1DP-201ENST00000635586 771 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 AC007114.2-201ENST00000576014 4281 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
EPHB3P54753 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.66□□□□□ -1.34
EPHB3P54753 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHB3P54753 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
EPHB3P54753 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHB3P54753 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
EPHB3P54753 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
EPHB3P54753 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
EPHB3P54753 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHB3P54753 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.65□□□□□ -1.34
EPHB3P54753 AC127070.3-201ENST00000503695 3263 ntBASIC6.65□□□□□ -1.34
EPHB3P54753 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
EPHB3P54753 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHB3P54753 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
EPHB3P54753 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
EPHB3P54753 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
EPHB3P54753 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
EPHB3P54753 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
EPHB3P54753 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHB3P54753 AC105114.1-201ENST00000624795 1862 ntBASIC6.65□□□□□ -1.34
EPHB3P54753 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms