Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AC017019.1-201ENST00000426129 261 ntBASIC6.22□□□□□ -1.41
COPB1P53618 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.22□□□□□ -1.41
COPB1P53618 TMEM183AP1-205ENST00000432739 290 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.22□□□□□ -1.41
COPB1P53618 ATP5LP2-201ENST00000440646 311 ntBASIC6.22□□□□□ -1.41
COPB1P53618 RPL6P30-201ENST00000443382 862 ntBASIC6.22□□□□□ -1.41
COPB1P53618 MTND2P25-201ENST00000449028 610 ntBASIC6.22□□□□□ -1.41
COPB1P53618 CST12P-201ENST00000457644 362 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AC073610.1-201ENST00000489971 396 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.22□□□□□ -1.41
COPB1P53618 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 AC105420.1-201ENST00000504389 582 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AC118282.1-201ENST00000506408 765 ntBASIC6.22□□□□□ -1.41
COPB1P53618 HSD3BP3-201ENST00000514706 994 ntBASIC6.22□□□□□ -1.41
COPB1P53618 SETP21-201ENST00000514799 892 ntBASIC6.22□□□□□ -1.41
COPB1P53618 RN7SKP253-201ENST00000516424 309 ntBASIC6.22□□□□□ -1.41
COPB1P53618 RNA5SP340-201ENST00000517132 107 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 OR4A17P-201ENST00000526032 904 ntBASIC6.22□□□□□ -1.41
COPB1P53618 PCNAP4-201ENST00000532690 730 ntBASIC6.22□□□□□ -1.41
COPB1P53618 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.22□□□□□ -1.41
COPB1P53618 AC122688.1-201ENST00000541494 223 ntBASIC6.22□□□□□ -1.41
COPB1P53618 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 AL356801.1-201ENST00000559320 294 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.22□□□□□ -1.41
COPB1P53618 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.22□□□□□ -1.41
COPB1P53618 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 AC090286.3-201ENST00000573133 187 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.22□□□□□ -1.41
COPB1P53618 COX6CP7-201ENST00000597056 208 ntBASIC6.22□□□□□ -1.41
COPB1P53618 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.22□□□□□ -1.41
COPB1P53618 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.22□□□□□ -1.41
COPB1P53618 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.22□□□□□ -1.41
COPB1P53618 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COPB1P53618 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COPB1P53618 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.21□□□□□ -1.41
COPB1P53618 PDZK1P1-202ENST00000425209 1350 ntBASIC6.21□□□□□ -1.41
COPB1P53618 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COPB1P53618 MIR133A2-201ENST00000347538 102 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AL159987.1-201ENST00000347911 293 ntBASIC6.21□□□□□ -1.42
COPB1P53618 TRAV35-201ENST00000390462 330 ntBASIC6.21□□□□□ -1.42
COPB1P53618 U3.28-201ENST00000391249 210 ntBASIC6.21□□□□□ -1.42
COPB1P53618 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.21□□□□□ -1.42
COPB1P53618 BX284632.2-201ENST00000421091 399 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.21□□□□□ -1.42
COPB1P53618 AC009784.1-201ENST00000426484 460 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AC073508.1-201ENST00000428866 656 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.21□□□□□ -1.42
COPB1P53618 PCBP2P1-201ENST00000437262 977 ntBASIC6.21□□□□□ -1.42
COPB1P53618 VN1R110P-201ENST00000438988 971 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AL359265.1-201ENST00000440296 795 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AL512605.1-202ENST00000441919 381 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.21□□□□□ -1.42
COPB1P53618 AL359955.2-201ENST00000445380 353 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.21□□□□□ -1.42
COPB1P53618 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.21□□□□□ -1.42
COPB1P53618 AC010460.2-201ENST00000509054 677 ntBASIC6.21□□□□□ -1.42
COPB1P53618 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.21□□□□□ -1.42
COPB1P53618 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.21□□□□□ -1.42
COPB1P53618 SCARNA18.1-201ENST00000516330 83 ntBASIC6.21□□□□□ -1.42
COPB1P53618 WBP1LP3-201ENST00000523033 208 ntBASIC6.21□□□□□ -1.42
COPB1P53618 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.21□□□□□ -1.42
COPB1P53618 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.21□□□□□ -1.42
COPB1P53618 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.21□□□□□ -1.42
COPB1P53618 AC018754.1-201ENST00000607486 925 ntBASIC6.21□□□□□ -1.42
COPB1P53618 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.21□□□□□ -1.42
COPB1P53618 MIR6793-201ENST00000612376 63 ntBASIC6.21□□□□□ -1.42
COPB1P53618 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.21□□□□□ -1.42
COPB1P53618 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 AC119674.1-220ENST00000641502 1048 ntBASIC6.21□□□□□ -1.42
COPB1P53618 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.21□□□□□ -1.42
COPB1P53618 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
COPB1P53618 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.21□□□□□ -1.42
COPB1P53618 AC018809.2-201ENST00000602436 3823 ntBASIC6.21□□□□□ -1.42
COPB1P53618 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COPB1P53618 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.21□□□□□ -1.42
COPB1P53618 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COPB1P53618 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.2□□□□□ -1.42
COPB1P53618 AL121839.2-201ENST00000565058 6943 ntBASIC6.2□□□□□ -1.42
COPB1P53618 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms