Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MIR4737-201ENST00000583979 81 ntBASIC7.57□□□□□ -1.2
MSH6P52701 AL031320.1-201ENST00000604177 357 ntBASIC7.57□□□□□ -1.2
MSH6P52701 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.57□□□□□ -1.2
MSH6P52701 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 AC005224.3-201ENST00000584683 2140 ntBASIC7.56□□□□□ -1.2
MSH6P52701 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.56□□□□□ -1.2
MSH6P52701 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 AC232271.1-201ENST00000602455 2715 ntBASIC7.56□□□□□ -1.2
MSH6P52701 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.56□□□□□ -1.2
MSH6P52701 AC007161.1-204ENST00000423039 460 ntBASIC7.56□□□□□ -1.2
MSH6P52701 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.56□□□□□ -1.2
MSH6P52701 VN1R21P-201ENST00000426703 765 ntBASIC7.56□□□□□ -1.2
MSH6P52701 AC073264.2-201ENST00000448886 166 ntBASIC7.56□□□□□ -1.2
MSH6P52701 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.56□□□□□ -1.2
MSH6P52701 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 OR7H2P-201ENST00000513483 306 ntBASIC7.56□□□□□ -1.2
MSH6P52701 IGKV2D-10-201ENST00000520194 281 ntBASIC7.56□□□□□ -1.2
MSH6P52701 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 AC136624.4-201ENST00000573044 370 ntBASIC7.56□□□□□ -1.2
MSH6P52701 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC7.56□□□□□ -1.2
MSH6P52701 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC7.56□□□□□ -1.2
MSH6P52701 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.56□□□□□ -1.2
MSH6P52701 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
MSH6P52701 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.55□□□□□ -1.2
MSH6P52701 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.55□□□□□ -1.2
MSH6P52701 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.55□□□□□ -1.2
MSH6P52701 AC068769.1-201ENST00000474767 2426 ntBASIC7.55□□□□□ -1.2
MSH6P52701 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
MSH6P52701 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
MSH6P52701 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.55□□□□□ -1.2
MSH6P52701 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
MSH6P52701 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 RPL32P3-201ENST00000359025 275 ntBASIC7.55□□□□□ -1.2
MSH6P52701 RN7SKP95-201ENST00000362860 303 ntBASIC7.55□□□□□ -1.2
MSH6P52701 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.55□□□□□ -1.2
MSH6P52701 P2RY10P2-201ENST00000416730 913 ntBASIC7.55□□□□□ -1.2
MSH6P52701 OR5M12P-201ENST00000423388 929 ntBASIC7.55□□□□□ -1.2
MSH6P52701 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.55□□□□□ -1.2
MSH6P52701 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 AC021006.3-201ENST00000530771 192 ntBASIC7.55□□□□□ -1.2
MSH6P52701 AC008033.2-201ENST00000542626 177 ntBASIC7.55□□□□□ -1.2
MSH6P52701 AC008147.3-201ENST00000548666 354 ntBASIC7.55□□□□□ -1.2
MSH6P52701 AC005341.1-201ENST00000571086 708 ntBASIC7.55□□□□□ -1.2
MSH6P52701 MIR5096-201ENST00000583713 70 ntBASIC7.55□□□□□ -1.2
MSH6P52701 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.55□□□□□ -1.2
MSH6P52701 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
MSH6P52701 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
MSH6P52701 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
MSH6P52701 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 MGAT2P2-201ENST00000427194 797 ntBASIC7.54□□□□□ -1.2
MSH6P52701 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 AL590399.4-201ENST00000436561 601 ntBASIC7.54□□□□□ -1.2
MSH6P52701 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 AC097484.1-201ENST00000471148 389 ntBASIC7.54□□□□□ -1.2
MSH6P52701 RN7SL817P-201ENST00000480777 288 ntBASIC7.54□□□□□ -1.2
MSH6P52701 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.54□□□□□ -1.2
MSH6P52701 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 AC134349.2-201ENST00000535136 910 ntBASIC7.54□□□□□ -1.2
MSH6P52701 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC7.54□□□□□ -1.2
MSH6P52701 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.54□□□□□ -1.2
MSH6P52701 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.54□□□□□ -1.2
MSH6P52701 AC009597.2-201ENST00000604659 592 ntBASIC7.54□□□□□ -1.2
MSH6P52701 AC073575.2-201ENST00000614212 627 ntBASIC7.54□□□□□ -1.2
MSH6P52701 AC010480.1-201ENST00000624823 684 ntBASIC7.54□□□□□ -1.2
MSH6P52701 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.54□□□□□ -1.2
MSH6P52701 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms