Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 RN7SKP275-201ENST00000364626 301 ntBASIC6.25□□□□□ -1.41
NEK3P51956 RNU6-185P-201ENST00000384421 107 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AL445238.1-204ENST00000400311 463 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AL096800.1-201ENST00000405326 893 ntBASIC6.25□□□□□ -1.41
NEK3P51956 HMGB1P13-201ENST00000406019 642 ntBASIC6.25□□□□□ -1.41
NEK3P51956 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 AC105402.1-201ENST00000413336 545 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AL158825.1-201ENST00000414735 521 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 DPPA2P2-201ENST00000418220 897 ntBASIC6.25□□□□□ -1.41
NEK3P51956 DPY19L1P2-201ENST00000426647 915 ntBASIC6.25□□□□□ -1.41
NEK3P51956 KCTD9P1-201ENST00000430462 1167 ntBASIC6.25□□□□□ -1.41
NEK3P51956 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 YWHAZP2-201ENST00000440317 728 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC069540.1-201ENST00000446320 988 ntBASIC6.25□□□□□ -1.41
NEK3P51956 GXYLT1P1-201ENST00000446657 490 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 AC002553.3-201ENST00000453002 341 ntBASIC6.25□□□□□ -1.41
NEK3P51956 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 RPL21P47-201ENST00000483696 477 ntBASIC6.25□□□□□ -1.41
NEK3P51956 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 AC133963.2-201ENST00000513686 578 ntBASIC6.25□□□□□ -1.41
NEK3P51956 MTATP6P9-201ENST00000515039 680 ntBASIC6.25□□□□□ -1.41
NEK3P51956 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 AC112198.4-201ENST00000515450 351 ntBASIC6.25□□□□□ -1.41
NEK3P51956 Y_RNA.710-201ENST00000516975 110 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.25□□□□□ -1.41
NEK3P51956 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 CYCSP38-201ENST00000559840 322 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.25□□□□□ -1.41
NEK3P51956 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.25□□□□□ -1.41
NEK3P51956 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.25□□□□□ -1.41
NEK3P51956 AP001267.4-201ENST00000602598 545 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC021851.1-201ENST00000608537 1082 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC093388.1-201ENST00000609166 430 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AL136097.3-201ENST00000611097 505 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC022106.1-201ENST00000612834 766 ntBASIC6.25□□□□□ -1.41
NEK3P51956 RFPL4AP6-201ENST00000616792 846 ntBASIC6.25□□□□□ -1.41
NEK3P51956 MIR6861-201ENST00000618657 64 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AL512652.1-201ENST00000619006 500 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC022306.3-201ENST00000619930 550 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC010435.1-201ENST00000623353 1177 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AP001153.1-201ENST00000641024 338 ntBASIC6.25□□□□□ -1.41
NEK3P51956 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.25□□□□□ -1.41
NEK3P51956 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 AC024651.2-201ENST00000562480 2098 ntBASIC6.25□□□□□ -1.41
NEK3P51956 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.25□□□□□ -1.41
NEK3P51956 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.25□□□□□ -1.41
NEK3P51956 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEK3P51956 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NEK3P51956 HSPD1P11-201ENST00000508643 1702 ntBASIC6.25□□□□□ -1.41
NEK3P51956 LYARP1-201ENST00000436977 1501 ntBASIC6.25□□□□□ -1.41
NEK3P51956 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.24□□□□□ -1.41
NEK3P51956 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NEK3P51956 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
NEK3P51956 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEK3P51956 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEK3P51956 SNORA21-201ENST00000362423 132 ntBASIC6.24□□□□□ -1.41
NEK3P51956 RNA5SP110-201ENST00000362638 115 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AC004386.1-201ENST00000393214 761 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AL096711.1-201ENST00000404780 554 ntBASIC6.24□□□□□ -1.41
NEK3P51956 SNORA11.3-201ENST00000408471 128 ntBASIC6.24□□□□□ -1.41
NEK3P51956 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.24□□□□□ -1.41
NEK3P51956 RNA5SP156-201ENST00000410250 110 ntBASIC6.24□□□□□ -1.41
NEK3P51956 BX664727.1-201ENST00000416024 466 ntBASIC6.24□□□□□ -1.41
NEK3P51956 RPS7P8-201ENST00000418311 581 ntBASIC6.24□□□□□ -1.41
NEK3P51956 OR51A6P-201ENST00000418680 1004 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.24□□□□□ -1.41
NEK3P51956 AL365220.1-201ENST00000432923 399 ntBASIC6.24□□□□□ -1.41
NEK3P51956 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.24□□□□□ -1.41
NEK3P51956 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.24□□□□□ -1.41
NEK3P51956 PPIAP27-201ENST00000453800 265 ntBASIC6.24□□□□□ -1.41
NEK3P51956 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.24□□□□□ -1.41
NEK3P51956 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.24□□□□□ -1.41
NEK3P51956 AC098847.1-201ENST00000473094 348 ntBASIC6.24□□□□□ -1.41
NEK3P51956 LSM3P4-201ENST00000502948 309 ntBASIC6.24□□□□□ -1.41
NEK3P51956 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.24□□□□□ -1.41
NEK3P51956 ASNSP4-201ENST00000511103 447 ntBASIC6.24□□□□□ -1.41
NEK3P51956 RNU5A-7P-201ENST00000515979 116 ntBASIC6.24□□□□□ -1.41
NEK3P51956 IGKV3D-25-201ENST00000519599 235 ntBASIC6.24□□□□□ -1.41
NEK3P51956 OR6M2P-201ENST00000529831 871 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.24□□□□□ -1.41
NEK3P51956 AC008083.2-201ENST00000546707 476 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.24□□□□□ -1.41
NEK3P51956 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms