Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC097467.4-201ENST00000605504 141 ntBASIC7.38□□□□□ -1.23
USP11P51784 OR51C1P-201ENST00000608504 942 ntBASIC7.38□□□□□ -1.23
USP11P51784 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 LINC02495-203ENST00000636704 242 ntBASIC7.38□□□□□ -1.23
USP11P51784 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
USP11P51784 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 OFD1P17-201ENST00000437639 3018 ntBASIC7.37□□□□□ -1.23
USP11P51784 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USP11P51784 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
USP11P51784 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USP11P51784 AC011455.2-201ENST00000599320 3336 ntBASIC7.37□□□□□ -1.23
USP11P51784 Y_RNA.88-201ENST00000363029 99 ntBASIC7.37□□□□□ -1.23
USP11P51784 RNA5SP350-201ENST00000363298 111 ntBASIC7.37□□□□□ -1.23
USP11P51784 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.37□□□□□ -1.23
USP11P51784 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
USP11P51784 AL050335.1-201ENST00000396909 869 ntBASIC7.37□□□□□ -1.23
USP11P51784 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 RN7SKP129-201ENST00000410288 299 ntBASIC7.37□□□□□ -1.23
USP11P51784 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.37□□□□□ -1.23
USP11P51784 AL513325.1-201ENST00000417716 1034 ntBASIC7.37□□□□□ -1.23
USP11P51784 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
USP11P51784 AC245291.3-201ENST00000443400 292 ntBASIC7.37□□□□□ -1.23
USP11P51784 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 YRDCP3-201ENST00000456507 480 ntBASIC7.37□□□□□ -1.23
USP11P51784 AC022415.1-202ENST00000486612 523 ntBASIC7.37□□□□□ -1.23
USP11P51784 AC068724.1-201ENST00000487100 792 ntBASIC7.37□□□□□ -1.23
USP11P51784 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 AC084337.1-201ENST00000524809 686 ntBASIC7.37□□□□□ -1.23
USP11P51784 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USP11P51784 NDUFS5P6-201ENST00000529136 295 ntBASIC7.37□□□□□ -1.23
USP11P51784 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.37□□□□□ -1.23
USP11P51784 BTG1P1-201ENST00000540396 508 ntBASIC7.37□□□□□ -1.23
USP11P51784 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
USP11P51784 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.37□□□□□ -1.23
USP11P51784 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.37□□□□□ -1.23
USP11P51784 AL078623.1-201ENST00000602702 907 ntBASIC7.37□□□□□ -1.23
USP11P51784 AP002360.3-201ENST00000607673 710 ntBASIC7.37□□□□□ -1.23
USP11P51784 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.37□□□□□ -1.23
USP11P51784 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
USP11P51784 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
USP11P51784 CR381670.1-201ENST00000624291 1693 ntBASIC7.37□□□□□ -1.23
USP11P51784 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
USP11P51784 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
USP11P51784 AL359195.2-201ENST00000623657 4412 ntBASIC7.37□□□□□ -1.23
USP11P51784 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USP11P51784 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USP11P51784 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
USP11P51784 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USP11P51784 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.36□□□□□ -1.23
USP11P51784 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.36□□□□□ -1.23
USP11P51784 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 AC004520.1-201ENST00000608362 1413 ntBASIC7.36□□□□□ -1.23
USP11P51784 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.36□□□□□ -1.23
USP11P51784 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 CCAT2-201ENST00000630920 1752 ntBASIC7.36□□□□□ -1.23
USP11P51784 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USP11P51784 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
USP11P51784 SNORA64.3-201ENST00000365647 134 ntBASIC7.36□□□□□ -1.23
USP11P51784 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.36□□□□□ -1.23
USP11P51784 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.36□□□□□ -1.23
USP11P51784 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.36□□□□□ -1.23
USP11P51784 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.36□□□□□ -1.23
USP11P51784 Z74696.2-201ENST00000436514 498 ntBASIC7.36□□□□□ -1.23
USP11P51784 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.36□□□□□ -1.23
USP11P51784 ARMC4P1-201ENST00000438905 707 ntBASIC7.36□□□□□ -1.23
USP11P51784 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.36□□□□□ -1.23
USP11P51784 MTCO1P19-201ENST00000443487 500 ntBASIC7.36□□□□□ -1.23
USP11P51784 AL590004.3-202ENST00000445883 451 ntBASIC7.36□□□□□ -1.23
USP11P51784 MGAT2P1-201ENST00000449718 797 ntBASIC7.36□□□□□ -1.23
USP11P51784 OR52E3P-201ENST00000452083 936 ntBASIC7.36□□□□□ -1.23
USP11P51784 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
USP11P51784 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.36□□□□□ -1.23
USP11P51784 RPS4XP6-201ENST00000477670 797 ntBASIC7.36□□□□□ -1.23
USP11P51784 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.36□□□□□ -1.23
USP11P51784 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.36□□□□□ -1.23
USP11P51784 HMGB1P3-201ENST00000502802 616 ntBASIC7.36□□□□□ -1.23
USP11P51784 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.36□□□□□ -1.23
USP11P51784 AC091965.3-201ENST00000506236 208 ntBASIC7.36□□□□□ -1.23
USP11P51784 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.36□□□□□ -1.23
USP11P51784 PGBD4P4-201ENST00000509673 613 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms