Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RNA5SP311-201ENST00000411290 116 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 AC007568.1-201ENST00000422912 471 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.63□□□□□ -1.51
BRCA2P51587 RPL6P5-201ENST00000445678 828 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 ATP5LP5-201ENST00000483050 299 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 RNA5SP315-201ENST00000516340 116 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 RNA5SP312-201ENST00000517068 116 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 MED28P5-201ENST00000528254 438 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.63□□□□□ -1.51
BRCA2P51587 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.63□□□□□ -1.51
BRCA2P51587 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
BRCA2P51587 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
BRCA2P51587 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.63□□□□□ -1.51
BRCA2P51587 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 AC114781.5-201ENST00000615297 108 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
BRCA2P51587 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 OR51B3P-201ENST00000412287 913 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 ARL2BPP10-201ENST00000446487 531 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 OR7E128P-201ENST00000532736 1024 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.62□□□□□ -1.51
BRCA2P51587 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.62□□□□□ -1.51
BRCA2P51587 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.62□□□□□ -1.51
BRCA2P51587 AP001029.2-203ENST00000589795 4910 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRCA2P51587 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
BRCA2P51587 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BRCA2P51587 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
BRCA2P51587 RBPJP2-201ENST00000618187 1444 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRCA2P51587 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRCA2P51587 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.62□□□□□ -1.51
BRCA2P51587 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.62□□□□□ -1.51
BRCA2P51587 MRPL35P2-201ENST00000448009 511 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 AC010326.1-201ENST00000462726 602 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.62□□□□□ -1.51
BRCA2P51587 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRCA2P51587 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.62□□□□□ -1.51
BRCA2P51587 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
BRCA2P51587 AF186996.5-201ENST00000418098 904 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.62□□□□□ -1.51
BRCA2P51587 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.62□□□□□ -1.51
BRCA2P51587 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 MIR6075-201ENST00000620782 95 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRCA2P51587 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
BRCA2P51587 CYP1D1P-201ENST00000416662 1433 ntBASIC5.62□□□□□ -1.51
BRCA2P51587 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 MON2-214ENST00000641654 10382 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 AC008280.1-201ENST00000418851 412 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 RNGTTP1-201ENST00000420965 728 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 AC073465.2-201ENST00000440938 498 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 AP000619.2-201ENST00000546014 969 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.61□□□□□ -1.51
BRCA2P51587 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.61□□□□□ -1.51
BRCA2P51587 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.61□□□□□ -1.51
BRCA2P51587 RAD17P1-201ENST00000418130 2042 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 CASC15-203ENST00000605917 4461 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.61□□□□□ -1.51
BRCA2P51587 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRCA2P51587 GAPDHP49-201ENST00000421421 961 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.61□□□□□ -1.51
BRCA2P51587 OR1H1P-201ENST00000448731 937 ntBASIC5.61□□□□□ -1.51
BRCA2P51587 AC244107.2-201ENST00000611773 76 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms