Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA2P51531 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC9.43□□□□□ -0.9
SMARCA2P51531 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA2P51531 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SMARCA2P51531 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.43□□□□□ -0.9
SMARCA2P51531 AC100871.1-201ENST00000507871 1456 ntBASIC9.43□□□□□ -0.9
SMARCA2P51531 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SMARCA2P51531 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SMARCA2P51531 BRD7P6-201ENST00000431406 1860 ntBASIC9.42□□□□□ -0.9
SMARCA2P51531 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SMARCA2P51531 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SMARCA2P51531 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC9.42□□□□□ -0.9
SMARCA2P51531 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA2P51531 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SMARCA2P51531 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC9.42□□□□□ -0.9
SMARCA2P51531 AC007559.1-201ENST00000428736 355 ntBASIC9.42□□□□□ -0.9
SMARCA2P51531 SLC25A15P5-201ENST00000508033 253 ntBASIC9.42□□□□□ -0.9
SMARCA2P51531 AC122688.1-201ENST00000541494 223 ntBASIC9.42□□□□□ -0.9
SMARCA2P51531 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC9.42□□□□□ -0.9
SMARCA2P51531 AC008814.1-201ENST00000603797 406 ntBASIC9.42□□□□□ -0.9
SMARCA2P51531 AC005252.1-201ENST00000604518 1063 ntBASIC9.42□□□□□ -0.9
SMARCA2P51531 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA2P51531 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SMARCA2P51531 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA2P51531 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC9.42□□□□□ -0.9
SMARCA2P51531 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA2P51531 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA2P51531 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
SMARCA2P51531 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA2P51531 RNA5SP332-201ENST00000391063 115 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 GLULP6-201ENST00000399502 913 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC9.41□□□□□ -0.9
SMARCA2P51531 IGBP1P3-201ENST00000447449 1000 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC9.41□□□□□ -0.9
SMARCA2P51531 HMGN2P25-201ENST00000486956 268 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 RNA5SP43-201ENST00000516559 110 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC9.41□□□□□ -0.9
SMARCA2P51531 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.41□□□□□ -0.9
SMARCA2P51531 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC9.41□□□□□ -0.9
SMARCA2P51531 AC022164.1-201ENST00000568767 2673 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC9.41□□□□□ -0.9
SMARCA2P51531 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 AL353796.1-201ENST00000561542 3241 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
SMARCA2P51531 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SMARCA2P51531 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SMARCA2P51531 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 FHIT-201ENST00000341848 174 ntTSL 3 BASIC9.41□□□□□ -0.9
SMARCA2P51531 AC069213.2-201ENST00000420238 366 ntBASIC9.41□□□□□ -0.9
SMARCA2P51531 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC9.41□□□□□ -0.9
SMARCA2P51531 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
SMARCA2P51531 MYLK-221ENST00000583087 678 ntTSL 4 BASIC9.41□□□□□ -0.9
SMARCA2P51531 UGP2-232ENST00000640075 567 ntTSL 5 BASIC9.41□□□□□ -0.9
SMARCA2P51531 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SMARCA2P51531 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC9.41□□□□□ -0.9
SMARCA2P51531 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA2P51531 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA2P51531 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA2P51531 AC068870.1-201ENST00000563737 2455 ntBASIC9.4□□□□□ -0.9
SMARCA2P51531 KYNUP3-201ENST00000574386 1341 ntBASIC9.4□□□□□ -0.9
SMARCA2P51531 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.4□□□□□ -0.9
SMARCA2P51531 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC9.4□□□□□ -0.9
SMARCA2P51531 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA2P51531 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA2P51531 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SMARCA2P51531 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC9.4□□□□□ -0.9
SMARCA2P51531 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SMARCA2P51531 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA2P51531 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC9.4□□□□□ -0.9
SMARCA2P51531 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC9.4□□□□□ -0.9
SMARCA2P51531 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC9.4□□□□□ -0.9
SMARCA2P51531 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC9.4□□□□□ -0.9
SMARCA2P51531 AL162431.4-201ENST00000604674 411 ntBASIC9.4□□□□□ -0.9
SMARCA2P51531 AL109618.2-201ENST00000605527 211 ntBASIC9.4□□□□□ -0.9
SMARCA2P51531 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC9.4□□□□□ -0.9
SMARCA2P51531 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SMARCA2P51531 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA2P51531 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA2P51531 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA2P51531 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA2P51531 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC9.39□□□□□ -0.91
SMARCA2P51531 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMARCA2P51531 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMARCA2P51531 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMARCA2P51531 AC091046.3-201ENST00000631455 1574 ntBASIC9.39□□□□□ -0.91
SMARCA2P51531 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC9.39□□□□□ -0.91
SMARCA2P51531 KRT8P51-201ENST00000438938 274 ntBASIC9.39□□□□□ -0.91
SMARCA2P51531 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC9.39□□□□□ -0.91
SMARCA2P51531 AC112498.1-201ENST00000444401 332 ntBASIC9.39□□□□□ -0.91
SMARCA2P51531 ATP5A1P7-201ENST00000453978 1279 ntBASIC9.39□□□□□ -0.91
SMARCA2P51531 SNORD125-201ENST00000459538 96 ntBASIC9.39□□□□□ -0.91
SMARCA2P51531 GAPDHP56-201ENST00000506031 988 ntBASIC9.39□□□□□ -0.91
SMARCA2P51531 SNORA70.11-201ENST00000515987 138 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms