Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGCLP35914 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
HMGCLP35914 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
HMGCLP35914 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 OR4G1P-202ENST00000641173 1788 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 TCP11X1-202ENST00000622971 1372 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HMGCLP35914 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 RN7SKP69-201ENST00000365390 305 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 MIR143-201ENST00000385300 106 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HMGCLP35914 U3.28-201ENST00000391249 210 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGCLP35914 BX276092.6-201ENST00000430476 250 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 RPL12P17-201ENST00000432393 498 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCLP35914 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC016724.1-201ENST00000453215 421 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 BX276092.8-201ENST00000455722 250 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCLP35914 EIF1P7-201ENST00000487533 337 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 AC090638.1-201ENST00000498296 909 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 AC104109.1-201ENST00000498563 436 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC091912.1-201ENST00000511351 248 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 IGLVIV-64-201ENST00000518581 301 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC078878.1-201ENST00000539832 958 ntBASIC5.48□□□□□ -1.53
HMGCLP35914 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
HMGCLP35914 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCLP35914 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCLP35914 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCLP35914 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCLP35914 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
HMGCLP35914 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCLP35914 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
HMGCLP35914 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCLP35914 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCLP35914 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HMGCLP35914 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCLP35914 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
HMGCLP35914 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 CASC19-248ENST00000641674 1356 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 MIR323A-201ENST00000362199 86 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 RNA5SP319-201ENST00000362768 119 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 RNA5SP435-201ENST00000364044 108 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCLP35914 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HMGCLP35914 SNORA11.3-201ENST00000408471 128 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 NDUFB4P8-201ENST00000435351 367 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AC012075.1-201ENST00000436549 580 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGCLP35914 AC023271.1-201ENST00000445936 1090 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AL672138.1-201ENST00000450604 1015 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGCLP35914 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGCLP35914 SEPT14P1-201ENST00000458703 648 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGCLP35914 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.47□□□□□ -1.53
HMGCLP35914 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HMGCLP35914 AC090286.3-201ENST00000573133 187 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGCLP35914 SNORD95-201ENST00000579879 68 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGCLP35914 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.47□□□□□ -1.53
HMGCLP35914 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGCLP35914 FAM72A-208ENST00000607379 1139 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGCLP35914 SNORA11.6-201ENST00000619030 128 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 AC073869.8-201ENST00000641806 335 ntBASIC5.47□□□□□ -1.53
HMGCLP35914 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGCLP35914 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCLP35914 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms