Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC104446.1-201ENST00000613728 1321 ntBASIC8.01□□□□□ -1.13
RXRBP28702 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
RXRBP28702 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8□□□□□ -1.13
RXRBP28702 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 RNA5SP305-201ENST00000362665 119 ntBASIC8□□□□□ -1.13
RXRBP28702 RNU1-46P-201ENST00000384425 164 ntBASIC8□□□□□ -1.13
RXRBP28702 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 AC233289.1-201ENST00000403700 508 ntBASIC8□□□□□ -1.13
RXRBP28702 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 MRPL53P1-201ENST00000414323 319 ntBASIC8□□□□□ -1.13
RXRBP28702 MTCO1P21-201ENST00000416634 589 ntBASIC8□□□□□ -1.13
RXRBP28702 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 AC245028.1-201ENST00000423259 256 ntBASIC8□□□□□ -1.13
RXRBP28702 VN1R25P-201ENST00000443385 738 ntBASIC8□□□□□ -1.13
RXRBP28702 MTND4LP3-201ENST00000468320 276 ntBASIC8□□□□□ -1.13
RXRBP28702 AC022215.1-201ENST00000481770 362 ntBASIC8□□□□□ -1.13
RXRBP28702 AC068587.1-201ENST00000483613 781 ntBASIC8□□□□□ -1.13
RXRBP28702 HMGB1P38-201ENST00000490557 577 ntBASIC8□□□□□ -1.13
RXRBP28702 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 UBTFL9-201ENST00000534504 1148 ntBASIC8□□□□□ -1.13
RXRBP28702 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC8□□□□□ -1.13
RXRBP28702 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC8□□□□□ -1.13
RXRBP28702 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 AC018558.5-201ENST00000565840 952 ntBASIC8□□□□□ -1.13
RXRBP28702 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8□□□□□ -1.13
RXRBP28702 SS18L2P2-201ENST00000583960 235 ntBASIC8□□□□□ -1.13
RXRBP28702 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC8□□□□□ -1.13
RXRBP28702 AL022067.1-201ENST00000602426 454 ntBASIC8□□□□□ -1.13
RXRBP28702 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC8□□□□□ -1.13
RXRBP28702 AL008723.3-201ENST00000608926 449 ntBASIC8□□□□□ -1.13
RXRBP28702 AC124016.2-201ENST00000610058 665 ntBASIC8□□□□□ -1.13
RXRBP28702 AC104073.3-201ENST00000610942 955 ntBASIC8□□□□□ -1.13
RXRBP28702 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8□□□□□ -1.13
RXRBP28702 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8□□□□□ -1.13
RXRBP28702 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8□□□□□ -1.13
RXRBP28702 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
RXRBP28702 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8□□□□□ -1.13
RXRBP28702 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RXRBP28702 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RXRBP28702 AC017079.1-201ENST00000333650 415 ntBASIC7.99□□□□□ -1.13
RXRBP28702 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RXRBP28702 AC008171.1-201ENST00000395058 200 ntBASIC7.99□□□□□ -1.13
RXRBP28702 RPL5P19-201ENST00000404228 893 ntBASIC7.99□□□□□ -1.13
RXRBP28702 VN1R31P-201ENST00000417498 730 ntBASIC7.99□□□□□ -1.13
RXRBP28702 RPS15AP30-201ENST00000420976 390 ntBASIC7.99□□□□□ -1.13
RXRBP28702 CYCSP52-201ENST00000422857 310 ntBASIC7.99□□□□□ -1.13
RXRBP28702 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.99□□□□□ -1.13
RXRBP28702 C4BPAP2-201ENST00000428434 478 ntBASIC7.99□□□□□ -1.13
RXRBP28702 CYCSP12-201ENST00000437729 300 ntBASIC7.99□□□□□ -1.13
RXRBP28702 MTCO1P53-201ENST00000441633 699 ntBASIC7.99□□□□□ -1.13
RXRBP28702 HSFY3P-201ENST00000444242 1191 ntBASIC7.99□□□□□ -1.13
RXRBP28702 GAPDHP23-201ENST00000444823 993 ntBASIC7.99□□□□□ -1.13
RXRBP28702 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 RANP2-201ENST00000456833 229 ntBASIC7.99□□□□□ -1.13
RXRBP28702 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 RN7SL385P-201ENST00000468873 276 ntBASIC7.99□□□□□ -1.13
RXRBP28702 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 RN7SL481P-201ENST00000477764 299 ntBASIC7.99□□□□□ -1.13
RXRBP28702 AC114728.1-201ENST00000488289 483 ntBASIC7.99□□□□□ -1.13
RXRBP28702 AC026826.1-201ENST00000493002 361 ntBASIC7.99□□□□□ -1.13
RXRBP28702 OR5BM1P-201ENST00000512021 366 ntBASIC7.99□□□□□ -1.13
RXRBP28702 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7.99□□□□□ -1.13
RXRBP28702 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.99□□□□□ -1.13
RXRBP28702 AC105185.1-201ENST00000518705 535 ntBASIC7.99□□□□□ -1.13
RXRBP28702 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.99□□□□□ -1.13
RXRBP28702 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC7.99□□□□□ -1.13
RXRBP28702 AC010306.1-201ENST00000523223 1117 ntBASIC7.99□□□□□ -1.13
RXRBP28702 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 AC137768.1-201ENST00000549998 553 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms