Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.69□□□□□ -1.18
VARSP26640 AC008055.1-201ENST00000547032 609 ntBASIC7.69□□□□□ -1.18
VARSP26640 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.69□□□□□ -1.18
VARSP26640 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.69□□□□□ -1.18
VARSP26640 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.69□□□□□ -1.18
VARSP26640 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.69□□□□□ -1.18
VARSP26640 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.69□□□□□ -1.18
VARSP26640 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.69□□□□□ -1.18
VARSP26640 MIR3714-201ENST00000579507 65 ntBASIC7.69□□□□□ -1.18
VARSP26640 RPL35AP25-201ENST00000584631 330 ntBASIC7.69□□□□□ -1.18
VARSP26640 LINC00674-202ENST00000590734 160 ntBASIC7.69□□□□□ -1.18
VARSP26640 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
VARSP26640 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.69□□□□□ -1.18
VARSP26640 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.69□□□□□ -1.18
VARSP26640 AL596327.1-201ENST00000603629 213 ntBASIC7.69□□□□□ -1.18
VARSP26640 YTHDF2P1-201ENST00000604759 1271 ntBASIC7.69□□□□□ -1.18
VARSP26640 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.69□□□□□ -1.18
VARSP26640 AL355974.3-201ENST00000617383 467 ntBASIC7.69□□□□□ -1.18
VARSP26640 STMN1P1-201ENST00000617809 440 ntBASIC7.69□□□□□ -1.18
VARSP26640 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.69□□□□□ -1.18
VARSP26640 MIR6723-201ENST00000621981 89 ntBASIC7.69□□□□□ -1.18
VARSP26640 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.69□□□□□ -1.18
VARSP26640 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.69□□□□□ -1.18
VARSP26640 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
VARSP26640 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
VARSP26640 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
VARSP26640 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
VARSP26640 AC004014.2-201ENST00000623718 5122 ntBASIC7.69□□□□□ -1.18
VARSP26640 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.69□□□□□ -1.18
VARSP26640 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
VARSP26640 AC020549.1-201ENST00000536916 1440 ntBASIC7.69□□□□□ -1.18
VARSP26640 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
VARSP26640 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
VARSP26640 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.68□□□□□ -1.18
VARSP26640 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AC138627.1-203ENST00000641872 1680 ntBASIC7.68□□□□□ -1.18
VARSP26640 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 OR5P1P-201ENST00000299512 925 ntBASIC7.68□□□□□ -1.18
VARSP26640 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 Y_RNA.97-201ENST00000363094 102 ntBASIC7.68□□□□□ -1.18
VARSP26640 RNU6-1318P-201ENST00000365389 103 ntBASIC7.68□□□□□ -1.18
VARSP26640 AL161909.1-201ENST00000397390 712 ntBASIC7.68□□□□□ -1.18
VARSP26640 AL080285.1-201ENST00000404225 984 ntBASIC7.68□□□□□ -1.18
VARSP26640 AL355375.1-201ENST00000405686 392 ntBASIC7.68□□□□□ -1.18
VARSP26640 AL451061.1-201ENST00000407887 862 ntBASIC7.68□□□□□ -1.18
VARSP26640 MIR1231-201ENST00000408101 92 ntBASIC7.68□□□□□ -1.18
VARSP26640 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
VARSP26640 RNU6-908P-201ENST00000410160 94 ntBASIC7.68□□□□□ -1.18
VARSP26640 RNA5SP118-201ENST00000410385 109 ntBASIC7.68□□□□□ -1.18
VARSP26640 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 RBMY2JP-201ENST00000425544 1059 ntBASIC7.68□□□□□ -1.18
VARSP26640 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 AC024082.2-201ENST00000434771 238 ntBASIC7.68□□□□□ -1.18
VARSP26640 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AL122013.1-201ENST00000473054 801 ntBASIC7.68□□□□□ -1.18
VARSP26640 AC073522.1-201ENST00000483312 377 ntBASIC7.68□□□□□ -1.18
VARSP26640 RPL34P33-201ENST00000486062 334 ntBASIC7.68□□□□□ -1.18
VARSP26640 RPL7AP26-201ENST00000488538 813 ntBASIC7.68□□□□□ -1.18
VARSP26640 RPS15AP36-201ENST00000492022 382 ntBASIC7.68□□□□□ -1.18
VARSP26640 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AC098583.2-201ENST00000504151 372 ntBASIC7.68□□□□□ -1.18
VARSP26640 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.68□□□□□ -1.18
VARSP26640 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.68□□□□□ -1.18
VARSP26640 AC090424.1-201ENST00000535243 736 ntBASIC7.68□□□□□ -1.18
VARSP26640 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 AC136618.2-201ENST00000575091 400 ntBASIC7.68□□□□□ -1.18
VARSP26640 RN7SL366P-201ENST00000577957 292 ntBASIC7.68□□□□□ -1.18
VARSP26640 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.68□□□□□ -1.18
VARSP26640 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 VN1R107P-201ENST00000601784 209 ntBASIC7.68□□□□□ -1.18
VARSP26640 AC123788.2-201ENST00000612290 283 ntBASIC7.68□□□□□ -1.18
VARSP26640 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.68□□□□□ -1.18
VARSP26640 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AC243756.2-201ENST00000618406 463 ntBASIC7.68□□□□□ -1.18
VARSP26640 AC090971.5-201ENST00000621102 293 ntBASIC7.68□□□□□ -1.18
VARSP26640 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms