Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BNIP3P7-201ENST00000605641 516 ntBASIC5.62□□□□□ -1.51
CDH3P22223 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH3P22223 MIR193BHG-214ENST00000641765 509 ntBASIC5.62□□□□□ -1.51
CDH3P22223 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH3P22223 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH3P22223 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 AL161756.3-201ENST00000641216 2071 ntBASIC5.62□□□□□ -1.51
CDH3P22223 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDH3P22223 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH3P22223 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 MIR323A-201ENST00000362199 86 ntBASIC5.61□□□□□ -1.51
CDH3P22223 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 AL358178.1-201ENST00000407698 397 ntBASIC5.61□□□□□ -1.51
CDH3P22223 OR2AT2P-201ENST00000413438 905 ntBASIC5.61□□□□□ -1.51
CDH3P22223 CDY17P-201ENST00000414121 1282 ntBASIC5.61□□□□□ -1.51
CDH3P22223 RPL34P3-201ENST00000421454 338 ntBASIC5.61□□□□□ -1.51
CDH3P22223 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH3P22223 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH3P22223 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.61□□□□□ -1.51
CDH3P22223 AC073410.1-201ENST00000435125 589 ntBASIC5.61□□□□□ -1.51
CDH3P22223 RPS3AP38-201ENST00000435889 763 ntBASIC5.61□□□□□ -1.51
CDH3P22223 RPS12P17-201ENST00000438591 377 ntBASIC5.61□□□□□ -1.51
CDH3P22223 SNRPFP2-201ENST00000440710 251 ntBASIC5.61□□□□□ -1.51
CDH3P22223 AC064862.4-201ENST00000442180 334 ntBASIC5.61□□□□□ -1.51
CDH3P22223 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 HMGN1P36-201ENST00000446623 298 ntBASIC5.61□□□□□ -1.51
CDH3P22223 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 AL157777.1-201ENST00000468100 304 ntBASIC5.61□□□□□ -1.51
CDH3P22223 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 AC022215.1-201ENST00000481770 362 ntBASIC5.61□□□□□ -1.51
CDH3P22223 RPL38P3-201ENST00000484463 213 ntBASIC5.61□□□□□ -1.51
CDH3P22223 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH3P22223 MIR2117-201ENST00000516780 80 ntBASIC5.61□□□□□ -1.51
CDH3P22223 AC007346.2-201ENST00000564816 892 ntBASIC5.61□□□□□ -1.51
CDH3P22223 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH3P22223 MIR4660-201ENST00000583549 74 ntBASIC5.61□□□□□ -1.51
CDH3P22223 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH3P22223 AC126175.1-201ENST00000617041 758 ntBASIC5.61□□□□□ -1.51
CDH3P22223 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 MIR4302-201ENST00000638058 60 ntBASIC5.61□□□□□ -1.51
CDH3P22223 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 AC087565.3-203ENST00000641018 837 ntBASIC5.61□□□□□ -1.51
CDH3P22223 SAMMSON-213ENST00000641336 1521 ntBASIC5.61□□□□□ -1.51
CDH3P22223 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CDH3P22223 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH3P22223 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH3P22223 AC130304.1-201ENST00000622942 2385 ntBASIC5.6□□□□□ -1.51
CDH3P22223 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 AP004607.3-201ENST00000530354 3915 ntBASIC5.6□□□□□ -1.51
CDH3P22223 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH3P22223 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
CDH3P22223 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH3P22223 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CDH3P22223 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH3P22223 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 MIR323B-201ENST00000385269 82 ntBASIC5.6□□□□□ -1.51
CDH3P22223 RN7SKP286-201ENST00000410894 299 ntBASIC5.6□□□□□ -1.51
CDH3P22223 SDHDP6-201ENST00000414693 480 ntBASIC5.6□□□□□ -1.51
CDH3P22223 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH3P22223 SETP10-201ENST00000424368 814 ntBASIC5.6□□□□□ -1.51
CDH3P22223 HMGB3P24-201ENST00000433260 622 ntBASIC5.6□□□□□ -1.51
CDH3P22223 AC138761.5-201ENST00000433967 325 ntBASIC5.6□□□□□ -1.51
CDH3P22223 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH3P22223 MED28P3-201ENST00000444288 531 ntBASIC5.6□□□□□ -1.51
CDH3P22223 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 YWHAEP1-201ENST00000453697 763 ntBASIC5.6□□□□□ -1.51
CDH3P22223 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH3P22223 AC239798.3-201ENST00000454459 408 ntBASIC5.6□□□□□ -1.51
CDH3P22223 RN7SL174P-201ENST00000475578 289 ntBASIC5.6□□□□□ -1.51
CDH3P22223 AC007688.1-201ENST00000475592 759 ntBASIC5.6□□□□□ -1.51
CDH3P22223 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH3P22223 IGLV3-30-201ENST00000524362 298 ntBASIC5.6□□□□□ -1.51
CDH3P22223 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CDH3P22223 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms