Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG1P18858 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 AC073365.1-203ENST00000641055 1992 ntBASIC7.5□□□□□ -1.21
LIG1P18858 HSPD1P11-201ENST00000508643 1702 ntBASIC7.49□□□□□ -1.21
LIG1P18858 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
LIG1P18858 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.49□□□□□ -1.21
LIG1P18858 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 AC007159.1-201ENST00000566529 4706 ntBASIC7.49□□□□□ -1.21
LIG1P18858 RNA5SP382-201ENST00000363355 112 ntBASIC7.49□□□□□ -1.21
LIG1P18858 RNU4-51P-201ENST00000364206 140 ntBASIC7.49□□□□□ -1.21
LIG1P18858 RNU4-4P-201ENST00000364588 130 ntBASIC7.49□□□□□ -1.21
LIG1P18858 Y_RNA.559-201ENST00000384686 107 ntBASIC7.49□□□□□ -1.21
LIG1P18858 SLC9B1P2-201ENST00000398120 1184 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AL359694.1-201ENST00000403247 604 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.49□□□□□ -1.21
LIG1P18858 AC011233.1-201ENST00000422812 283 ntBASIC7.49□□□□□ -1.21
LIG1P18858 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.49□□□□□ -1.21
LIG1P18858 AP003385.1-201ENST00000426387 893 ntBASIC7.49□□□□□ -1.21
LIG1P18858 Z68868.1-201ENST00000429048 544 ntBASIC7.49□□□□□ -1.21
LIG1P18858 NANOGP2-201ENST00000435391 727 ntBASIC7.49□□□□□ -1.21
LIG1P18858 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.49□□□□□ -1.21
LIG1P18858 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 AC234781.3-201ENST00000452540 973 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AC090114.3-201ENST00000479267 829 ntBASIC7.49□□□□□ -1.21
LIG1P18858 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.49□□□□□ -1.21
LIG1P18858 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.49□□□□□ -1.21
LIG1P18858 MRPL57P6-201ENST00000506570 309 ntBASIC7.49□□□□□ -1.21
LIG1P18858 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.49□□□□□ -1.21
LIG1P18858 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.49□□□□□ -1.21
LIG1P18858 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.49□□□□□ -1.21
LIG1P18858 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.49□□□□□ -1.21
LIG1P18858 AGGF1P4-201ENST00000568249 801 ntBASIC7.49□□□□□ -1.21
LIG1P18858 RN7SL270P-201ENST00000579643 281 ntBASIC7.49□□□□□ -1.21
LIG1P18858 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.49□□□□□ -1.21
LIG1P18858 AL031985.2-201ENST00000600955 480 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AL357078.3-201ENST00000607528 618 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AC092794.1-201ENST00000612734 582 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AC005277.2-201ENST00000617898 390 ntBASIC7.49□□□□□ -1.21
LIG1P18858 AL138693.1-201ENST00000622219 129 ntBASIC7.49□□□□□ -1.21
LIG1P18858 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
LIG1P18858 AL121936.2-201ENST00000641935 662 ntBASIC7.49□□□□□ -1.21
LIG1P18858 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.49□□□□□ -1.21
LIG1P18858 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG1P18858 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.48□□□□□ -1.21
LIG1P18858 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LIG1P18858 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
LIG1P18858 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LIG1P18858 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LIG1P18858 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LIG1P18858 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.48□□□□□ -1.21
LIG1P18858 RNU6-1320P-201ENST00000390838 107 ntBASIC7.48□□□□□ -1.21
LIG1P18858 RNU6-1269P-201ENST00000391139 107 ntBASIC7.48□□□□□ -1.21
LIG1P18858 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 AL096711.1-201ENST00000404780 554 ntBASIC7.48□□□□□ -1.21
LIG1P18858 AL353133.1-201ENST00000407695 401 ntBASIC7.48□□□□□ -1.21
LIG1P18858 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.48□□□□□ -1.21
LIG1P18858 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.48□□□□□ -1.21
LIG1P18858 CYCSP52-201ENST00000422857 310 ntBASIC7.48□□□□□ -1.21
LIG1P18858 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC7.48□□□□□ -1.21
LIG1P18858 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms