Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH1P12830 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH1P12830 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH1P12830 AL158211.2-201ENST00000607282 395 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC016542.1-201ENST00000608259 493 ntBASIC5.52□□□□□ -1.53
CDH1P12830 MIR6133-201ENST00000617057 108 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AL035661.1-201ENST00000620459 1144 ntBASIC5.52□□□□□ -1.53
CDH1P12830 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDH1P12830 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 AL137058.3-201ENST00000624531 3099 ntBASIC5.51□□□□□ -1.53
CDH1P12830 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 MRRFP1-201ENST00000435941 1675 ntBASIC5.51□□□□□ -1.53
CDH1P12830 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 AC023490.2-201ENST00000359859 470 ntBASIC5.51□□□□□ -1.53
CDH1P12830 MIR375-201ENST00000362103 64 ntBASIC5.51□□□□□ -1.53
CDH1P12830 RN7SKP69-201ENST00000365390 305 ntBASIC5.51□□□□□ -1.53
CDH1P12830 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH1P12830 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDH1P12830 RNU6-564P-201ENST00000410983 104 ntBASIC5.51□□□□□ -1.53
CDH1P12830 RNGTTP1-201ENST00000420965 728 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC127526.2-201ENST00000426436 775 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AL590623.1-201ENST00000427864 105 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH1P12830 HMGB3P24-201ENST00000433260 622 ntBASIC5.51□□□□□ -1.53
CDH1P12830 RPL12P18-201ENST00000437175 325 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH1P12830 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH1P12830 AC022215.1-201ENST00000481770 362 ntBASIC5.51□□□□□ -1.53
CDH1P12830 RN7SL570P-201ENST00000484405 292 ntBASIC5.51□□□□□ -1.53
CDH1P12830 RPSAP51-201ENST00000497462 645 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH1P12830 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH1P12830 AC074255.1-201ENST00000511259 501 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH1P12830 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH1P12830 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.51□□□□□ -1.53
CDH1P12830 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH1P12830 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH1P12830 AC009852.2-201ENST00000567898 485 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH1P12830 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH1P12830 AL391001.1-201ENST00000602747 715 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC105148.1-201ENST00000604961 409 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH1P12830 WBP1LP8-201ENST00000617401 327 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AC253576.2-201ENST00000618815 580 ntBASIC5.51□□□□□ -1.53
CDH1P12830 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH1P12830 AC087565.3-203ENST00000641018 837 ntBASIC5.51□□□□□ -1.53
CDH1P12830 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH1P12830 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CDH1P12830 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 HSPA8P14-201ENST00000552265 1805 ntBASIC5.51□□□□□ -1.53
CDH1P12830 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH1P12830 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CDH1P12830 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 AC106872.5-201ENST00000508856 1416 ntBASIC5.5□□□□□ -1.53
CDH1P12830 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH1P12830 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH1P12830 SNORA64.1-201ENST00000362600 132 ntBASIC5.5□□□□□ -1.53
CDH1P12830 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH1P12830 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH1P12830 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 RNU1-136P-201ENST00000384181 164 ntBASIC5.5□□□□□ -1.53
CDH1P12830 TRAV35-201ENST00000390462 330 ntBASIC5.5□□□□□ -1.53
CDH1P12830 OOSP1-201ENST00000398992 1270 ntBASIC5.5□□□□□ -1.53
CDH1P12830 RPS3AP2-201ENST00000407190 754 ntBASIC5.5□□□□□ -1.53
CDH1P12830 SNORA11.5-201ENST00000408163 128 ntBASIC5.5□□□□□ -1.53
CDH1P12830 MIR1282-201ENST00000408865 101 ntBASIC5.5□□□□□ -1.53
CDH1P12830 MTND2P9-201ENST00000422293 931 ntBASIC5.5□□□□□ -1.53
CDH1P12830 AC002069.1-201ENST00000429649 1159 ntBASIC5.5□□□□□ -1.53
CDH1P12830 ZFAND6P1-201ENST00000434138 605 ntBASIC5.5□□□□□ -1.53
CDH1P12830 SUMO2P8-201ENST00000434672 286 ntBASIC5.5□□□□□ -1.53
CDH1P12830 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH1P12830 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH1P12830 RPS10P18-201ENST00000442662 495 ntBASIC5.5□□□□□ -1.53
CDH1P12830 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH1P12830 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH1P12830 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms