Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.66□□□□□ -1.5
PCNAP12004 RPL35AP3-201ENST00000414680 288 ntBASIC5.66□□□□□ -1.5
PCNAP12004 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCNAP12004 RPS12P17-201ENST00000438591 377 ntBASIC5.66□□□□□ -1.5
PCNAP12004 SCAND3P1-201ENST00000439854 1060 ntBASIC5.66□□□□□ -1.5
PCNAP12004 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.66□□□□□ -1.5
PCNAP12004 AC005165.2-201ENST00000466070 380 ntBASIC5.66□□□□□ -1.5
PCNAP12004 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.66□□□□□ -1.5
PCNAP12004 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.66□□□□□ -1.5
PCNAP12004 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.66□□□□□ -1.5
PCNAP12004 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.66□□□□□ -1.5
PCNAP12004 RNU6-319P-201ENST00000516025 108 ntBASIC5.66□□□□□ -1.5
PCNAP12004 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.66□□□□□ -1.5
PCNAP12004 AC011853.1-201ENST00000518911 454 ntBASIC5.66□□□□□ -1.5
PCNAP12004 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.66□□□□□ -1.5
PCNAP12004 AC092451.2-201ENST00000538746 658 ntBASIC5.66□□□□□ -1.5
PCNAP12004 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.66□□□□□ -1.5
PCNAP12004 RPA2P1-201ENST00000556557 721 ntBASIC5.66□□□□□ -1.5
PCNAP12004 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.66□□□□□ -1.5
PCNAP12004 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.66□□□□□ -1.5
PCNAP12004 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.66□□□□□ -1.5
PCNAP12004 AL359091.2-201ENST00000609303 556 ntBASIC5.66□□□□□ -1.5
PCNAP12004 AC084824.5-201ENST00000612009 413 ntBASIC5.66□□□□□ -1.5
PCNAP12004 AC006249.1-201ENST00000621223 471 ntBASIC5.66□□□□□ -1.5
PCNAP12004 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.66□□□□□ -1.5
PCNAP12004 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCNAP12004 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCNAP12004 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 AC110792.3-201ENST00000595906 1614 ntBASIC5.66□□□□□ -1.5
PCNAP12004 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
PCNAP12004 AL603750.1-201ENST00000624216 1717 ntBASIC5.65□□□□□ -1.5
PCNAP12004 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 AC109446.4-201ENST00000623235 2755 ntBASIC5.65□□□□□ -1.5
PCNAP12004 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
PCNAP12004 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PCNAP12004 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PCNAP12004 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PCNAP12004 PTGES3P2-201ENST00000407942 482 ntBASIC5.65□□□□□ -1.5
PCNAP12004 RNA5SP431-201ENST00000410312 120 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 XKRY2-201ENST00000442362 1093 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.65□□□□□ -1.5
PCNAP12004 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 CTSLP6-201ENST00000458273 1002 ntBASIC5.65□□□□□ -1.5
PCNAP12004 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.65□□□□□ -1.5
PCNAP12004 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.65□□□□□ -1.5
PCNAP12004 RBBP4P1-201ENST00000502424 1276 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.65□□□□□ -1.5
PCNAP12004 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 FTH1P11-201ENST00000517577 551 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 AC078899.1-201ENST00000521432 1185 ntBASIC5.65□□□□□ -1.5
PCNAP12004 WBP1LP3-201ENST00000523033 208 ntBASIC5.65□□□□□ -1.5
PCNAP12004 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PCNAP12004 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.65□□□□□ -1.5
PCNAP12004 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.65□□□□□ -1.5
PCNAP12004 AC005244.1-201ENST00000582566 339 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.65□□□□□ -1.5
PCNAP12004 AC008507.3-201ENST00000585753 472 ntBASIC5.65□□□□□ -1.5
PCNAP12004 BNIP3P39-201ENST00000601077 554 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AC067838.1-201ENST00000606064 577 ntBASIC5.65□□□□□ -1.5
PCNAP12004 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 AP001437.1-201ENST00000608783 456 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AP000240.1-201ENST00000609910 452 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.65□□□□□ -1.5
PCNAP12004 AL139099.4-201ENST00000614802 114 ntBASIC5.65□□□□□ -1.5
PCNAP12004 AL355974.3-201ENST00000617383 467 ntBASIC5.65□□□□□ -1.5
PCNAP12004 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCNAP12004 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.65□□□□□ -1.5
PCNAP12004 OR11H2-202ENST00000641517 1085 ntBASIC5.65□□□□□ -1.5
PCNAP12004 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCNAP12004 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.65□□□□□ -1.51
PCNAP12004 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
PCNAP12004 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
PCNAP12004 AC009501.3-201ENST00000605001 1352 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms