Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC245452.2-201ENST00000435222 392 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 EEF1A1P39-201ENST00000440791 250 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC073109.1-201ENST00000445066 978 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 RPS6P2-201ENST00000454208 705 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 HLA-DPA3-207ENST00000454398 229 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 GTF2IP12-201ENST00000456547 356 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 LSM3P4-201ENST00000502948 309 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 OR7E99P-201ENST00000505750 922 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC112225.1-201ENST00000508230 297 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC106872.4-201ENST00000510050 523 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 RNA5SP303-201ENST00000516192 130 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC015802.2-201ENST00000589690 189 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC011445.2-201ENST00000599274 173 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC009237.12-201ENST00000604755 742 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AF250324.2-201ENST00000608299 610 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF663P-202ENST00000641770 1131 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AL355974.1-201ENST00000618896 1708 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC023818.2-201ENST00000623817 2304 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RNU6-224P-201ENST00000384055 107 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RNU6-932P-201ENST00000391108 106 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AL512422.1-201ENST00000407033 553 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SKP271-201ENST00000410528 320 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC124944.2-201ENST00000429866 1242 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 MRPS10P2-201ENST00000431226 381 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC098826.1-201ENST00000433943 471 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 GTF2IP7-202ENST00000436677 309 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AL671855.1-201ENST00000446875 1203 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC097463.1-201ENST00000447288 481 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 HMGB1P5-202ENST00000451497 985 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC005410.1-202ENST00000460347 485 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RNU6-720P-201ENST00000516363 108 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RNU6-1178P-201ENST00000516674 107 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 CCNG2P1-201ENST00000549521 1000 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AP005205.1-201ENST00000563503 508 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC106785.4-201ENST00000569492 412 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC004232.1-201ENST00000571388 208 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC069366.1-201ENST00000583159 838 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SKP299-201ENST00000606679 301 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AC024884.1-201ENST00000620583 399 ntBASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
CSB-PGBD3P0DP91 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CSB-PGBD3P0DP91 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
CSB-PGBD3P0DP91 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CSB-PGBD3P0DP91 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
CSB-PGBD3P0DP91 AP005139.1-201ENST00000580702 1647 ntBASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms