Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
SFTPBP07988 TMSB4XP2-201ENST00000335179 210 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 RNFT1P3-201ENST00000340898 1052 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 RNA5SP477-201ENST00000362639 119 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SFTPBP07988 SUGT1P2-201ENST00000379452 992 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 SNORA5.1-201ENST00000384275 131 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 MT-RNR1-201ENST00000389680 954 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC005522.1-201ENST00000395416 346 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 RPL35AP3-201ENST00000414680 288 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.99□□□□□ -1.61
SFTPBP07988 NAP1L4P2-201ENST00000425958 899 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 CRIP1P1-201ENST00000427567 185 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC138761.5-201ENST00000433967 325 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC099670.2-201ENST00000435130 321 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC096775.1-201ENST00000437724 448 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 NDUFA5P8-201ENST00000449019 346 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 BUD31P2-201ENST00000449374 300 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.99□□□□□ -1.61
SFTPBP07988 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 AC023245.1-201ENST00000468501 517 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC011411.1-201ENST00000509592 876 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.99□□□□□ -1.61
SFTPBP07988 AC020937.1-201ENST00000519677 1013 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.99□□□□□ -1.61
SFTPBP07988 AL121594.2-201ENST00000541658 472 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.99□□□□□ -1.61
SFTPBP07988 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 RPA2P1-201ENST00000556557 721 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 GARSP1-201ENST00000570895 719 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AP005119.1-201ENST00000580956 292 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.99□□□□□ -1.61
SFTPBP07988 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.99□□□□□ -1.61
SFTPBP07988 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.99□□□□□ -1.61
SFTPBP07988 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.99□□□□□ -1.61
SFTPBP07988 HMGB1P51-201ENST00000605166 638 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 BX322635.1-201ENST00000605804 496 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AL133481.2-203ENST00000607558 139 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
SFTPBP07988 AC026124.2-201ENST00000621847 656 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SFTPBP07988 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.99□□□□□ -1.61
SFTPBP07988 TCP11X1-202ENST00000622971 1372 ntBASIC4.99□□□□□ -1.61
SFTPBP07988 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SFTPBP07988 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SFTPBP07988 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.98□□□□□ -1.61
SFTPBP07988 Z95331.1-201ENST00000623075 23112 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 MFSD8-239ENST00000641590 2479 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SFTPBP07988 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SFTPBP07988 SELENOWP1-201ENST00000322792 252 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SFTPBP07988 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SFTPBP07988 RNA5SP273-201ENST00000362484 113 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 RNU6-1251P-201ENST00000364502 107 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 RN7SKP78-201ENST00000364711 318 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SFTPBP07988 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SFTPBP07988 HMGN1P20-201ENST00000411849 300 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.98□□□□□ -1.61
SFTPBP07988 AL158827.1-201ENST00000416300 391 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.98□□□□□ -1.61
SFTPBP07988 MTCYBP7-201ENST00000419540 1134 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 RPS3P2-201ENST00000421346 701 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 KIF4CP-201ENST00000422742 1279 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.98□□□□□ -1.61
SFTPBP07988 AC005077.1-201ENST00000449226 375 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.98□□□□□ -1.61
SFTPBP07988 AC004129.2-201ENST00000457229 287 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 STRADBP1-201ENST00000478954 1281 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 AC006539.1-201ENST00000481419 501 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 PDCL3P4-201ENST00000489621 720 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 RPL7P51-201ENST00000490532 749 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SFTPBP07988 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.98□□□□□ -1.61
SFTPBP07988 AC114781.3-201ENST00000512083 142 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.98□□□□□ -1.61
SFTPBP07988 Y_RNA.667-201ENST00000516212 107 ntBASIC4.98□□□□□ -1.61
SFTPBP07988 AC060775.1-201ENST00000518241 520 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms