Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.21□□□□□ -1.9
APOBP04114 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.21□□□□□ -1.9
APOBP04114 CBX1P1-201ENST00000440184 427 ntBASIC3.21□□□□□ -1.9
APOBP04114 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.21□□□□□ -1.9
APOBP04114 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBP04114 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
APOBP04114 AC020779.1-201ENST00000478757 796 ntBASIC3.21□□□□□ -1.9
APOBP04114 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBP04114 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.21□□□□□ -1.9
APOBP04114 SCARNA20.4-201ENST00000516969 131 ntBASIC3.21□□□□□ -1.9
APOBP04114 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBP04114 AC069366.1-201ENST00000583159 838 ntBASIC3.21□□□□□ -1.9
APOBP04114 AL034374.2-201ENST00000605281 548 ntBASIC3.21□□□□□ -1.9
APOBP04114 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBP04114 AC011944.2-201ENST00000624440 683 ntBASIC3.21□□□□□ -1.9
APOBP04114 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.21□□□□□ -1.9
APOBP04114 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
APOBP04114 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.21□□□□□ -1.9
APOBP04114 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 AC010478.1-201ENST00000601500 6762 ntBASIC3.21□□□□□ -1.9
APOBP04114 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 RPL23AP17-201ENST00000401064 499 ntBASIC3.21□□□□□ -1.9
APOBP04114 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.21□□□□□ -1.9
APOBP04114 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 RPL7P57-201ENST00000423238 740 ntBASIC3.21□□□□□ -1.9
APOBP04114 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.21□□□□□ -1.9
APOBP04114 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.21□□□□□ -1.9
APOBP04114 AURKAPS2-201ENST00000454983 333 ntBASIC3.21□□□□□ -1.9
APOBP04114 AC006338.2-201ENST00000616864 791 ntBASIC3.21□□□□□ -1.9
APOBP04114 AC087821.1-201ENST00000623639 567 ntBASIC3.21□□□□□ -1.9
APOBP04114 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBP04114 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 AC099654.2-201ENST00000433031 1980 ntBASIC3.21□□□□□ -1.9
APOBP04114 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 IGKV7-3-201ENST00000357453 298 ntBASIC3.2□□□□□ -1.9
APOBP04114 RNU1-85P-201ENST00000364127 164 ntBASIC3.2□□□□□ -1.9
APOBP04114 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 AC000111.2-201ENST00000448200 210 ntBASIC3.2□□□□□ -1.9
APOBP04114 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 AC093827.1-201ENST00000480094 861 ntBASIC3.2□□□□□ -1.9
APOBP04114 ATP5LP5-201ENST00000483050 299 ntBASIC3.2□□□□□ -1.9
APOBP04114 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC3.2□□□□□ -1.9
APOBP04114 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.2□□□□□ -1.9
APOBP04114 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.2□□□□□ -1.9
APOBP04114 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 AC107980.1-201ENST00000558671 3355 ntBASIC3.2□□□□□ -1.9
APOBP04114 AL732292.1-201ENST00000426692 226 ntBASIC3.2□□□□□ -1.9
APOBP04114 AL365220.1-201ENST00000432923 399 ntBASIC3.2□□□□□ -1.9
APOBP04114 OR4C10P-201ENST00000434991 931 ntBASIC3.2□□□□□ -1.9
APOBP04114 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 AC011276.1-201ENST00000469688 323 ntBASIC3.2□□□□□ -1.9
APOBP04114 AC013356.1-201ENST00000489027 564 ntBASIC3.2□□□□□ -1.9
APOBP04114 AC008958.1-201ENST00000511047 682 ntBASIC3.2□□□□□ -1.9
APOBP04114 IGKV1-32-201ENST00000519290 311 ntBASIC3.2□□□□□ -1.9
APOBP04114 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 AC005252.1-201ENST00000604518 1063 ntBASIC3.2□□□□□ -1.9
APOBP04114 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
APOBP04114 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 TCEA1P1-201ENST00000449716 880 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms