Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 AC008079.2-201ENST00000623543 20396 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SPTA1P02549 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 MFSD8-239ENST00000641590 2479 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SPTA1P02549 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 MIR133B-201ENST00000362210 119 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 AC009237.10-201ENST00000414112 510 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 AC009237.5-201ENST00000414271 501 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC015983.1-201ENST00000441577 373 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 OR13K1P-201ENST00000444577 975 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 RN7SL352P-201ENST00000466002 277 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 RN7SKP288-201ENST00000516227 268 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC011840.5-201ENST00000582125 771 ntBASIC5.03□□□□□ -1.6
SPTA1P02549 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.03□□□□□ -1.6
SPTA1P02549 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.03□□□□□ -1.6
SPTA1P02549 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
SPTA1P02549 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPTA1P02549 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.02□□□□□ -1.61
SPTA1P02549 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SPTA1P02549 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SPTA1P02549 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SPTA1P02549 AC104118.1-201ENST00000607625 1589 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SPTA1P02549 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPTA1P02549 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SPTA1P02549 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
SPTA1P02549 CASC19-221ENST00000641309 1382 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SPTA1P02549 AP003170.5-201ENST00000397185 335 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 MIR1193-201ENST00000408109 78 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 AC009480.2-201ENST00000422916 432 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.02□□□□□ -1.61
SPTA1P02549 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.02□□□□□ -1.61
SPTA1P02549 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.02□□□□□ -1.61
SPTA1P02549 OR52B5P-201ENST00000435337 951 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.02□□□□□ -1.61
SPTA1P02549 RPS23P2-201ENST00000463671 415 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 OR11I1P-201ENST00000486033 954 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 SNORD91A-202ENST00000609620 191 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.02□□□□□ -1.61
SPTA1P02549 OR52B5P-202ENST00000641118 1110 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SPTA1P02549 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPTA1P02549 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPTA1P02549 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SPTA1P02549 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SPTA1P02549 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.02□□□□□ -1.61
SPTA1P02549 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPTA1P02549 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPTA1P02549 AL139039.2-201ENST00000407436 479 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.02□□□□□ -1.61
SPTA1P02549 AL359073.1-201ENST00000448036 403 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 RPL10P17-201ENST00000453852 316 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 RPL7L1P3-201ENST00000455249 689 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 AL603882.1-201ENST00000463059 681 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 AC026402.1-201ENST00000513642 170 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 RN7SKP99-201ENST00000517028 307 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 IGHVIII-13-1-201ENST00000517613 291 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 AC008147.3-201ENST00000548666 354 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.02□□□□□ -1.61
SPTA1P02549 AC106730.2-201ENST00000566641 540 ntBASIC5.02□□□□□ -1.61
SPTA1P02549 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.02□□□□□ -1.61
SPTA1P02549 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
SPTA1P02549 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.01□□□□□ -1.61
SPTA1P02549 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.01□□□□□ -1.61
SPTA1P02549 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.01□□□□□ -1.61
SPTA1P02549 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.01□□□□□ -1.61
SPTA1P02549 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.01□□□□□ -1.61
SPTA1P02549 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SPTA1P02549 AL049693.1-201ENST00000402760 611 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 RPL23AP18-201ENST00000416139 468 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 RSL24D1P6-201ENST00000426934 401 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.01□□□□□ -1.61
SPTA1P02549 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 AC073264.2-201ENST00000448886 166 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.01□□□□□ -1.61
SPTA1P02549 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.01□□□□□ -1.61
SPTA1P02549 BTF3P13-201ENST00000513224 490 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 AC078899.1-201ENST00000521432 1185 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SPTA1P02549 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.01□□□□□ -1.61
SPTA1P02549 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms