Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.46□□□□□ -1.37
COL1A1P02452 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.37
COL1A1P02452 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.46□□□□□ -1.38
COL1A1P02452 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.46□□□□□ -1.38
COL1A1P02452 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 U3.3-201ENST00000362986 216 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 AL035419.1-201ENST00000397037 564 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 FAR2P2-201ENST00000413041 594 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.46□□□□□ -1.38
COL1A1P02452 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 FAR2P4-202ENST00000425399 584 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.46□□□□□ -1.38
COL1A1P02452 AC073648.4-201ENST00000442655 781 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.46□□□□□ -1.38
COL1A1P02452 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.46□□□□□ -1.38
COL1A1P02452 Z92846.1-201ENST00000456203 268 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 RN7SL188P-201ENST00000469842 285 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.46□□□□□ -1.38
COL1A1P02452 RN7SL591P-201ENST00000496150 292 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.46□□□□□ -1.38
COL1A1P02452 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.46□□□□□ -1.38
COL1A1P02452 AC134349.2-201ENST00000535136 910 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.46□□□□□ -1.38
COL1A1P02452 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.46□□□□□ -1.38
COL1A1P02452 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.46□□□□□ -1.38
COL1A1P02452 AC108738.1-201ENST00000603703 237 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 AC005084.1-201ENST00000605160 304 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 AL353662.3-201ENST00000625131 237 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 AC073869.8-201ENST00000641806 335 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 AC003973.3-201ENST00000624863 2822 ntBASIC6.46□□□□□ -1.38
COL1A1P02452 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL1A1P02452 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.46□□□□□ -1.38
COL1A1P02452 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.45□□□□□ -1.38
COL1A1P02452 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.45□□□□□ -1.38
COL1A1P02452 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 HMGB1P32-201ENST00000425971 565 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.45□□□□□ -1.38
COL1A1P02452 AC092647.3-201ENST00000443044 633 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AC092647.2-201ENST00000452998 253 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AC092324.1-201ENST00000468671 324 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 OR51K1P-201ENST00000510214 950 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 EIF3KP3-201ENST00000514461 639 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 BRD9P1-201ENST00000529855 560 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.45□□□□□ -1.38
COL1A1P02452 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.45□□□□□ -1.38
COL1A1P02452 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.45□□□□□ -1.38
COL1A1P02452 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.45□□□□□ -1.38
COL1A1P02452 MIR4480-201ENST00000582492 71 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AC087783.2-201ENST00000605070 562 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AC093388.1-201ENST00000609166 430 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AC244107.2-201ENST00000611773 76 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AL627230.1-201ENST00000613077 211 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AL591926.8-201ENST00000616876 211 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 MIR6810-201ENST00000622701 70 ntBASIC6.45□□□□□ -1.38
COL1A1P02452 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
COL1A1P02452 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.45□□□□□ -1.38
COL1A1P02452 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.45□□□□□ -1.38
COL1A1P02452 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.45□□□□□ -1.38
COL1A1P02452 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.45□□□□□ -1.38
COL1A1P02452 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.45□□□□□ -1.38
COL1A1P02452 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.45□□□□□ -1.38
COL1A1P02452 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.45□□□□□ -1.38
COL1A1P02452 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL1A1P02452 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL1A1P02452 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL1A1P02452 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.44□□□□□ -1.38
COL1A1P02452 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 AL033543.1-201ENST00000623440 13454 ntBASIC6.44□□□□□ -1.38
COL1A1P02452 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COL1A1P02452 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.44□□□□□ -1.38
COL1A1P02452 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL1A1P02452 MIR105-1-201ENST00000385222 81 ntBASIC6.44□□□□□ -1.38
COL1A1P02452 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL1A1P02452 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms