Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TUBBP10-201ENST00000427668 1301 ntBASIC8.37□□□□□ -1.07
RNF40O75150 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 RNU6-543P-201ENST00000362576 108 ntBASIC8.37□□□□□ -1.07
RNF40O75150 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 RNU6-1263P-201ENST00000384601 106 ntBASIC8.37□□□□□ -1.07
RNF40O75150 RPL35AP24-201ENST00000413846 330 ntBASIC8.37□□□□□ -1.07
RNF40O75150 RPS26P13-201ENST00000419030 330 ntBASIC8.37□□□□□ -1.07
RNF40O75150 Z82205.1-201ENST00000428456 297 ntBASIC8.37□□□□□ -1.07
RNF40O75150 OR2B7P-201ENST00000429302 934 ntBASIC8.37□□□□□ -1.07
RNF40O75150 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.37□□□□□ -1.07
RNF40O75150 MTND6P18-201ENST00000439477 513 ntBASIC8.37□□□□□ -1.07
RNF40O75150 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC8.37□□□□□ -1.07
RNF40O75150 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 ACTR3P3-201ENST00000480448 893 ntBASIC8.37□□□□□ -1.07
RNF40O75150 AL163540.1-201ENST00000485382 386 ntBASIC8.37□□□□□ -1.07
RNF40O75150 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 PDPN-205ENST00000487038 607 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 RN7SL464P-201ENST00000492743 297 ntBASIC8.37□□□□□ -1.07
RNF40O75150 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 AC018639.1-201ENST00000492994 442 ntBASIC8.37□□□□□ -1.07
RNF40O75150 DYNLL1P6-201ENST00000503440 264 ntBASIC8.37□□□□□ -1.07
RNF40O75150 KCTD9P2-201ENST00000512203 1013 ntBASIC8.37□□□□□ -1.07
RNF40O75150 RN7SKP14-201ENST00000516000 329 ntBASIC8.37□□□□□ -1.07
RNF40O75150 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC8.37□□□□□ -1.07
RNF40O75150 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC8.37□□□□□ -1.07
RNF40O75150 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.37□□□□□ -1.07
RNF40O75150 AC243312.1-201ENST00000570582 275 ntBASIC8.37□□□□□ -1.07
RNF40O75150 BOLA2P1-201ENST00000584794 232 ntBASIC8.37□□□□□ -1.07
RNF40O75150 AC005332.6-201ENST00000613178 446 ntBASIC8.37□□□□□ -1.07
RNF40O75150 AC068234.2-201ENST00000619646 522 ntBASIC8.37□□□□□ -1.07
RNF40O75150 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.37□□□□□ -1.07
RNF40O75150 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
RNF40O75150 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.37□□□□□ -1.07
RNF40O75150 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
RNF40O75150 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
RNF40O75150 AL034417.4-202ENST00000642135 2236 ntBASIC8.37□□□□□ -1.07
RNF40O75150 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
RNF40O75150 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
RNF40O75150 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RNF40O75150 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.36□□□□□ -1.07
RNF40O75150 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RNF40O75150 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC8.36□□□□□ -1.07
RNF40O75150 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.36□□□□□ -1.07
RNF40O75150 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RNF40O75150 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 RNA5SP149-201ENST00000364952 92 ntBASIC8.36□□□□□ -1.07
RNF40O75150 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC8.36□□□□□ -1.07
RNF40O75150 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RNF40O75150 RNU6-43P-201ENST00000384302 107 ntBASIC8.36□□□□□ -1.07
RNF40O75150 RNU6-505P-201ENST00000384427 107 ntBASIC8.36□□□□□ -1.07
RNF40O75150 NACAP7-201ENST00000407371 609 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC109638.1-201ENST00000417406 326 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC008155.1-201ENST00000421078 329 ntBASIC8.36□□□□□ -1.07
RNF40O75150 MTCYBP8-201ENST00000422855 651 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AL645936.2-201ENST00000430565 928 ntBASIC8.36□□□□□ -1.07
RNF40O75150 RPL12P4-201ENST00000432629 497 ntBASIC8.36□□□□□ -1.07
RNF40O75150 HBBP1-201ENST00000433329 439 ntBASIC8.36□□□□□ -1.07
RNF40O75150 OR5M13P-201ENST00000433944 937 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 SNRPEP4-201ENST00000435815 279 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 AL731563.1-201ENST00000442202 214 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC8.36□□□□□ -1.07
RNF40O75150 HMGN1P36-201ENST00000446623 298 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 AC006480.1-201ENST00000449887 378 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AL672138.1-201ENST00000450604 1015 ntBASIC8.36□□□□□ -1.07
RNF40O75150 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.36□□□□□ -1.07
RNF40O75150 RPL12P32-201ENST00000484010 494 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC098583.2-201ENST00000504151 372 ntBASIC8.36□□□□□ -1.07
RNF40O75150 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 AC010493.1-201ENST00000513479 292 ntBASIC8.36□□□□□ -1.07
RNF40O75150 RNU7-30P-201ENST00000516835 62 ntBASIC8.36□□□□□ -1.07
RNF40O75150 SNORA81.2-201ENST00000516868 170 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.36□□□□□ -1.07
RNF40O75150 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC8.36□□□□□ -1.07
RNF40O75150 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC8.36□□□□□ -1.07
RNF40O75150 GTF2IP8-201ENST00000560687 584 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms