Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC133794.1-201ENST00000602731 914 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AC026979.4-201ENST00000606555 645 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC244100.4-201ENST00000617747 388 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC099654.6-201ENST00000636487 512 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
FOXN3O00409 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXN3O00409 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
FOXN3O00409 LYARP1-201ENST00000436977 1501 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 HSPA8P19-201ENST00000505359 1517 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXN3O00409 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 AP004607.3-201ENST00000530354 3915 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXN3O00409 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
FOXN3O00409 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 AC138907.8-201ENST00000623981 2256 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
FOXN3O00409 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
FOXN3O00409 COX6B1P3-201ENST00000312310 260 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 U3.10-201ENST00000364459 214 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.27□□□□□ -1.41
FOXN3O00409 TAF9BP2-201ENST00000400856 499 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 NIFKP3-201ENST00000417799 865 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXN3O00409 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 AC007679.3-201ENST00000434035 414 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 VN1R110P-201ENST00000438988 971 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AMYP1-201ENST00000440059 1023 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 RPSAP40-201ENST00000442343 891 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 CFL1P4-201ENST00000451536 498 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 PPIAP27-201ENST00000453800 265 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 AC118758.1-202ENST00000454719 225 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 CST12P-201ENST00000457644 362 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 RN7SL193P-201ENST00000491708 276 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 RNU6-415P-201ENST00000516252 97 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.27□□□□□ -1.41
FOXN3O00409 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.27□□□□□ -1.41
FOXN3O00409 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 AC008507.3-201ENST00000585753 472 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AC090236.2-201ENST00000587933 1101 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AL513327.3-201ENST00000602618 469 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AC093388.1-201ENST00000609166 430 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AL352984.2-202ENST00000613699 155 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AL031658.2-201ENST00000616850 651 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXN3O00409 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXN3O00409 AL591926.1-201ENST00000620542 217 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AC021422.1-201ENST00000621212 473 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AC025262.3-201ENST00000623666 360 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 AC007683.2-201ENST00000624681 714 ntBASIC6.27□□□□□ -1.41
FOXN3O00409 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
FOXN3O00409 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
FOXN3O00409 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXN3O00409 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXN3O00409 FBXL21-201ENST00000297158 1305 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
FOXN3O00409 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.26□□□□□ -1.41
FOXN3O00409 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
FOXN3O00409 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
FOXN3O00409 RNU1-65P-201ENST00000363919 148 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 TATDN1P1-201ENST00000414123 891 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms