Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MIR375-201ENST00000362103 64 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 SNORA16A-201ENST00000384342 137 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 RPL6P21-201ENST00000418672 846 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC090142.2-201ENST00000483263 416 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 NIFKP7-201ENST00000503365 834 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 RN7SL356P-201ENST00000582228 248 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC018690.1-201ENST00000608144 626 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC109583.2-201ENST00000617367 129 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AL157762.1-201ENST00000619612 415 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC138965.3-201ENST00000623875 498 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC073593.1-201ENST00000624500 411 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AC119674.1-217ENST00000641942 1086 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 LINC01963-201ENST00000562038 3148 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AL449283.1-201ENST00000602631 3403 ntBASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TRIM49D1C9J1S8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 MIR621-201ENST00000384919 96 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 RAB5CP1-201ENST00000395972 580 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC066692.1-201ENST00000421721 457 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 RPL12P17-201ENST00000432393 498 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC069154.1-201ENST00000432914 542 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 PCNPP2-201ENST00000441651 455 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC022133.1-201ENST00000490961 571 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC026782.2-201ENST00000510845 636 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC060775.1-201ENST00000518241 520 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC011853.1-201ENST00000518911 454 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 BCAS2P1-201ENST00000528022 632 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC022884.2-201ENST00000578535 580 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC010487.1-201ENST00000594408 1172 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC012616.1-201ENST00000600294 197 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC099654.11-201ENST00000638857 294 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC003985.2-201ENST00000562268 1669 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 AC114947.2-201ENST00000565748 2125 ntBASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM49D1C9J1S8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 LINC02019-201ENST00000608605 2060 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 IFIT1P1-201ENST00000400497 1449 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 GAPDHP42-201ENST00000406848 981 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AL133173.1-201ENST00000423458 397 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AC110602.1-201ENST00000437414 318 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AL450996.1-201ENST00000445574 1202 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 HLA-DPA3-207ENST00000454398 229 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 RPL7P41-201ENST00000485823 957 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 RN7SKP70-201ENST00000516655 271 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 SNORA43.3-201ENST00000517240 103 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AC022360.1-201ENST00000521058 340 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AP004607.2-201ENST00000533949 322 ntBASIC5.35□□□□□ -1.55
TRIM49D1C9J1S8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms