Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AP001496.3-201ENST00000580230 913 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC074140.1-201ENST00000621617 208 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC079776.5-201ENST00000641920 211 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 GTF2IP4-201ENST00000453092 2054 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC009962.1-201ENST00000567327 3813 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC114774.1-201ENST00000507410 1770 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC104964.3-201ENST00000606115 2860 ntBASIC4.63□□□□□ -1.67
SRRM4A7MD48 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRRM4A7MD48 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SRRM4A7MD48 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL606537.1-201ENST00000607258 2011 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 RAD1P1-201ENST00000231383 813 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 TMSB4XP2-201ENST00000335179 210 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 RNA5SP273-201ENST00000362484 113 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 RNU1-65P-201ENST00000363919 148 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 RNA5SP500-201ENST00000364486 119 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL357752.1-201ENST00000412817 349 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 RNGTTP1-201ENST00000420965 728 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC019205.1-201ENST00000421830 730 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 MGAT2P2-201ENST00000427194 797 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC006326.1-201ENST00000445465 787 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 OR7E116P-201ENST00000448529 957 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 RPS23P9-201ENST00000448848 438 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 MTND2P25-201ENST00000449028 610 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 SEPT7P3-201ENST00000455017 621 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC068228.1-201ENST00000461723 211 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC005165.2-201ENST00000466070 380 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 RPS7P6-201ENST00000485777 579 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 DUTP1-201ENST00000493631 470 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 LSM3P4-201ENST00000502948 309 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 GAPDHP62-201ENST00000515313 990 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 RNA5SP438-201ENST00000516561 112 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC026826.3-201ENST00000561747 158 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 NANOGP3-201ENST00000605855 286 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC034236.3-201ENST00000605999 461 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC242628.1-201ENST00000606810 391 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL451049.1-201ENST00000608672 497 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 AC015712.7-201ENST00000615211 635 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 AL591926.1-201ENST00000620542 217 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 RPL23AP61-201ENST00000623642 466 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 PDZK1P1-202ENST00000425209 1350 ntBASIC4.62□□□□□ -1.67
SRRM4A7MD48 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.62□□□□□ -1.67
SRRM4A7MD48 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRRM4A7MD48 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms