Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 USP9YP2-201ENST00000504503 1000 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 IMPA1P1-201ENST00000510718 842 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 USP9YP1-201ENST00000513521 1002 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC022616.2-201ENST00000523185 300 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC027369.5-201ENST00000533838 755 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 MIR4675-201ENST00000577898 77 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AP005119.1-201ENST00000580956 292 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 uc_338.7-201ENST00000621834 124 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC003973.3-201ENST00000624863 2822 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 AC093775.1-201ENST00000624154 1868 ntBASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
RCL1Q9Y2P8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC027228.2-201ENST00000567141 2154 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC008079.2-201ENST00000623543 20396 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 GAPDHP24-201ENST00000328713 983 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL353625.1-202ENST00000366273 571 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 SNORA48.4-201ENST00000391089 134 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 CTSL3P-202ENST00000412179 788 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 RPL12P9-201ENST00000412942 488 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL022324.2-201ENST00000434827 780 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC016772.1-201ENST00000444170 1261 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC012512.1-201ENST00000446594 718 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL445991.1-201ENST00000450381 475 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AP000797.2-201ENST00000475768 606 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 GAPDHP71-201ENST00000511530 1003 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 RPS27AP18-201ENST00000515536 459 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC009879.1-201ENST00000520029 839 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 IGLV3-30-201ENST00000524362 298 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 MIR4472-2-201ENST00000582069 67 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 H3F3BP2-201ENST00000583907 357 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC005479.3-201ENST00000602790 431 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL136131.3-201ENST00000607600 188 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AL365181.4-201ENST00000609800 547 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC005899.6-201ENST00000620729 297 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 MRRFP1-201ENST00000435941 1675 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 AC123912.3-201ENST00000600907 1367 ntBASIC4.5□□□□□ -1.69
RCL1Q9Y2P8 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms