Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RN7SL57P-201ENST00000493687 290 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC108157.1-201ENST00000510511 539 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC133794.1-201ENST00000602731 914 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 MTATP6P2-201ENST00000603319 678 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC027449.1-201ENST00000608890 407 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC063944.3-201ENST00000609969 533 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC004477.3-201ENST00000614061 590 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC022467.1-201ENST00000614738 749 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AP006248.3-201ENST00000623580 594 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 CR788268.1-201ENST00000603931 1809 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 CCNT2P1-201ENST00000423082 1315 ntBASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SSX2IPQ9Y2D8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC025470.1-201ENST00000510053 2032 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC011815.2-201ENST00000618230 2021 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 SELENOWP1-201ENST00000322792 252 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 RPL23AP17-201ENST00000401064 499 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AL356057.1-202ENST00000402263 756 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AL513325.1-201ENST00000417716 1034 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC093155.2-201ENST00000420734 937 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AL121882.1-201ENST00000422893 417 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 BX323845.3-201ENST00000428215 527 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC126120.1-201ENST00000431082 470 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AL512593.1-201ENST00000444758 779 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC099521.1-201ENST00000482557 334 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 RPS4XP14-201ENST00000493072 781 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC090058.1-201ENST00000498788 435 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 RNU6-943P-201ENST00000516960 98 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC027544.3-201ENST00000535082 757 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC074029.2-201ENST00000551045 634 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 MIR3189-201ENST00000578735 73 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 CLIC4P2-201ENST00000601934 717 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC135178.6-201ENST00000605314 398 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AF129408.1-201ENST00000608767 431 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AC112503.2-201ENST00000609005 552 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AL691477.1-201ENST00000624398 162 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 MAPK10-350ENST00000641777 965 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 DDX6P1-205ENST00000441966 1436 ntBASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX2IPQ9Y2D8 LINC02019-201ENST00000608605 2060 ntBASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX2IPQ9Y2D8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms