Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC106872.4-201ENST00000510050 523 ntBASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 SETP21-201ENST00000514799 892 ntBASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 GLYCAM1-201ENST00000546596 285 ntBASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 AC009063.1-201ENST00000563342 702 ntBASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 AC011445.2-201ENST00000599274 173 ntBASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 AC116618.1-201ENST00000634617 774 ntBASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ZC3H4Q9UPT8 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AP002364.1-201ENST00000623330 3386 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC011008.2-201ENST00000624866 3352 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 OR52B5P-204ENST00000641744 3467 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 OR7E25P-202ENST00000641088 5937 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RPS4XP5-202ENST00000449995 1334 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 CCDC162P-202ENST00000368966 6751 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RN7SKP107-201ENST00000364157 290 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RNU6-259P-201ENST00000383999 107 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MTCO3P31-201ENST00000405526 789 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 NPM1P4-201ENST00000414095 812 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 OR51A5P-201ENST00000415429 942 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 OR5AW1P-201ENST00000426334 1006 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AL391987.1-201ENST00000441025 200 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AL662791.1-201ENST00000441992 928 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 SSXP1-201ENST00000453640 473 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC104109.1-201ENST00000498563 436 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 PRELID3BP4-201ENST00000515476 571 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RNU6-507P-201ENST00000516045 100 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RNU6-314P-201ENST00000516574 104 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 OR11J2P-201ENST00000555298 907 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 EIF5A2P1-201ENST00000564027 460 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MIR3912-201ENST00000577566 105 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MIR4502-201ENST00000580432 81 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 FGF7P1-201ENST00000582820 288 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RN7SL178P-201ENST00000582930 304 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC015801.1-201ENST00000585651 153 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 BNIP3P26-201ENST00000600827 554 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AP001267.4-201ENST00000602598 545 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AL138895.2-201ENST00000603019 178 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MIR7854-201ENST00000620068 65 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC025048.6-202ENST00000627667 438 ntBASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
ZC3H4Q9UPT8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms