Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC013429.1-201ENST00000456604 422 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 VN1R104P-201ENST00000505115 1009 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC008496.1-201ENST00000509131 295 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC112206.3-201ENST00000514578 389 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC105417.1-201ENST00000514691 285 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 HIGD1AP9-201ENST00000550710 279 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC040162.2-201ENST00000573092 157 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 MIR6736-201ENST00000616799 59 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 MAPK6PS3-201ENST00000403865 2162 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 RERE-203ENST00000400907 2973 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC090643.1-201ENST00000623600 3100 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 MELK-208ENST00000536987 2125 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC127502.2-201ENST00000602663 2351 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 MGP-201ENST00000228938 694 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 SNORA51.7-201ENST00000384171 134 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AL592114.1-201ENST00000403842 483 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 RNU6-985P-201ENST00000410182 104 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC004690.1-201ENST00000418216 328 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 PTP4A1P1-201ENST00000420539 515 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC108039.2-201ENST00000440214 359 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC079448.1-201ENST00000449377 373 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 C1DP4-201ENST00000455429 424 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 RPL12P40-201ENST00000467028 488 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 RN7SL563P-201ENST00000481233 298 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 CDH12P2-201ENST00000504393 298 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 RNA5SP287-201ENST00000516358 103 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 MYL6-211ENST00000548580 528 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 SNRPGP18-201ENST00000553000 214 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 UBE2CP1-201ENST00000557130 554 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 FRG2DP-202ENST00000566967 323 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC243312.1-201ENST00000570582 275 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 STX8-209ENST00000574431 731 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 MIR4437-201ENST00000581331 60 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC011840.5-201ENST00000582125 771 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC010928.1-201ENST00000592477 1447 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 RPS28P1-201ENST00000604589 187 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AL157817.1-201ENST00000614264 790 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 AC084781.2-201ENST00000615568 161 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 VEZF1P1-201ENST00000423931 1541 ntBASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM35Q9UPQ4 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TRIM35Q9UPQ4 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms