Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
NPC1L1Q9UHC9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AL590763.1-201ENST00000398297 1545 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC005294.1-201ENST00000355509 281 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 SNORA70-201ENST00000384436 135 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 NUDT19P3-201ENST00000404698 555 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC093655.2-201ENST00000425735 631 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 DNAJB5P1-201ENST00000454004 806 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC015864.1-201ENST00000496512 544 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 IMPA1P1-201ENST00000510718 842 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AC069307.1-201ENST00000602820 447 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 AL512329.2-201ENST00000607350 548 ntBASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPC1L1Q9UHC9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 CR383656.5-201ENST00000547616 1340 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 SLC35E1P1-201ENST00000419313 864 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 MTND2P40-201ENST00000436718 841 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 CNOT7P2-201ENST00000441051 832 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AC104634.1-201ENST00000452720 462 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 RN7SL814P-201ENST00000487715 300 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AL049779.2-201ENST00000553847 315 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AP005131.7-201ENST00000610087 611 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AC003973.3-201ENST00000624863 2822 ntBASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPC1L1Q9UHC9 AC007342.5-201ENST00000571340 2142 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 U3.3-201ENST00000362986 216 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 RPS27AP6-201ENST00000427962 448 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 RPL7AP49-201ENST00000429522 581 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AL591438.1-201ENST00000433508 581 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC245047.2-201ENST00000441060 530 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC231760.1-201ENST00000498002 260 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 IGBP1P4-201ENST00000503202 879 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC006499.3-201ENST00000506077 748 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 CDC42P3-201ENST00000518493 633 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC006210.2-201ENST00000367074 1545 ntBASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPC1L1Q9UHC9 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 RNA5SP443-201ENST00000363083 132 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 RNU1-149P-201ENST00000390870 161 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AP000534.2-201ENST00000412729 568 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms