Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MIR6085-201ENST00000618314 110 ntBASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 AL158163.2-201ENST00000619110 700 ntBASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 AC009779.8-201ENST00000641684 4384 ntBASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 AC009120.2-204ENST00000621548 2032 ntBASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 AC092104.1-201ENST00000497346 1441 ntBASIC5.82□□□□□ -1.48
PARPBPQ9NWS1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MTHFD2P5-201ENST00000320415 844 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 FAM32BP-201ENST00000344033 333 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 VIM2P-201ENST00000402383 1294 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 VN1R31P-201ENST00000417498 730 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AL139184.1-202ENST00000422303 222 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC064862.5-201ENST00000440618 334 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC068135.1-201ENST00000446164 246 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MYO5BP2-201ENST00000449815 1277 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC108734.3-201ENST00000481241 1165 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC015524.1-201ENST00000491585 472 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 RPS27AP16-201ENST00000492222 470 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 XKRY-201ENST00000510392 1100 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MTND3P5-201ENST00000512798 333 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 RNU6-1028P-201ENST00000517164 93 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC073581.1-201ENST00000519036 575 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 OR52K3P-201ENST00000531655 943 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 CBX3P7-201ENST00000532876 502 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC007346.1-201ENST00000569208 867 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MIR4433B-201ENST00000581329 102 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MIR212-201ENST00000586026 110 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 BNIP3P30-201ENST00000601184 574 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC097467.4-201ENST00000605504 141 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 SNORD96A-201ENST00000606577 79 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC013468.1-201ENST00000608680 598 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MIR6885-201ENST00000612241 66 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AL133243.1-201ENST00000614487 366 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC116165.2-201ENST00000616705 206 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AL121890.3-201ENST00000618494 516 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 Z69908.1-201ENST00000622603 247 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AC018692.2-201ENST00000624130 348 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 MIR1322-201ENST00000638013 71 ntBASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PARPBPQ9NWS1 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms