Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 C4BPAP1-201ENST00000415474 1893 ntBASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF3Q9HD45 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TM9SF3Q9HD45 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TM9SF3Q9HD45 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.71□□□□□ -1.49
TM9SF3Q9HD45 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TM9SF3Q9HD45 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AL590763.1-201ENST00000398297 1545 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 PEX12P1-201ENST00000400284 1048 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 MIR1286-201ENST00000408112 78 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC007394.1-201ENST00000421941 531 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 SBDSP1-204ENST00000453858 737 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AL603882.1-201ENST00000463059 681 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC100832.1-201ENST00000471945 383 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 OR2AO1P-201ENST00000476497 403 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC087672.1-201ENST00000479876 766 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 RPS3AP15-201ENST00000483874 781 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 RPL38P3-201ENST00000484463 213 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 TOMM22P4-201ENST00000511318 336 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC063977.5-201ENST00000601044 974 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AL359513.1-201ENST00000614364 557 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 TTC39DP-201ENST00000416781 1688 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC109780.1-201ENST00000451768 1344 ntBASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF3Q9HD45 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 RNA5SP131-201ENST00000365452 119 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC019205.1-201ENST00000421830 730 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 BX276092.6-201ENST00000430476 250 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 BX276092.8-201ENST00000455722 250 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 LDHBP2-201ENST00000456969 1005 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 RN7SL610P-201ENST00000463845 291 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC016687.1-201ENST00000482574 353 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 RPL32P9-201ENST00000487963 407 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 NPM1P28-201ENST00000492269 840 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 OR5M14P-201ENST00000506803 618 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC044860.2-201ENST00000561005 179 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 BNIP3P32-201ENST00000600015 554 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AL356608.1-201ENST00000610034 820 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC005840.5-201ENST00000619166 599 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 MIR6730-201ENST00000622213 67 ntBASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF3Q9HD45 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms