Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 MTND5P11-201ENST00000511037 1812 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 MTND5P31-201ENST00000419366 1374 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC123769.1-201ENST00000530992 3192 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AP000432.2-201ENST00000624164 2048 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC138907.8-201ENST00000623981 2256 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 RNU4-28P-201ENST00000364739 141 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 RNU1-84P-201ENST00000365447 164 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 SNORD116-2-201ENST00000384274 95 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 RNU6-906P-201ENST00000384700 70 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 SNORD116-6-201ENST00000384711 96 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 RPL10P10-201ENST00000403509 664 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LIPT1P1-201ENST00000415870 1186 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL645939.3-201ENST00000435408 225 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 Z99714.1-201ENST00000450463 807 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC092155.2-201ENST00000454675 477 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 RANP2-201ENST00000456833 229 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 RPSAP39-201ENST00000467439 883 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC116562.1-201ENST00000485355 781 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 PPP1R11P1-201ENST00000486095 376 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 RN7SL714P-201ENST00000487050 298 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 HPRT1P1-201ENST00000509498 657 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC145350.1-201ENST00000567426 208 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC106734.1-201ENST00000568646 663 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 BMS1P7-201ENST00000602440 1052 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC025857.2-201ENST00000602711 238 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 Z82195.1-201ENST00000604558 398 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 OR7E91P-202ENST00000642062 1198 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 SAMM50P1-201ENST00000455403 1399 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AL136984.1-201ENST00000607611 1893 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 AC007382.1-201ENST00000624376 2618 ntBASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
AMBRA1Q9C0C7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 SAMMSON-210ENST00000641260 1308 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AL132656.3-201ENST00000606384 1595 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 MIR1275-201ENST00000408770 80 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms