Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL132875.1-201ENST00000403623 949 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 TRIM60P17-201ENST00000415181 719 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC013268.2-201ENST00000420753 337 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 NMNAT1P2-201ENST00000435192 860 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AL353662.1-201ENST00000439099 327 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AL138878.2-201ENST00000440581 1241 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 MTND4P18-201ENST00000447010 465 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 MORF4L1P4-201ENST00000450245 976 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC093719.1-201ENST00000480427 441 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 RN7SKP35-201ENST00000517210 151 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 MRPS36P3-201ENST00000519284 130 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 CYCSP38-201ENST00000559840 322 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 NDUFA5P11-201ENST00000567995 343 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 MIR3189-201ENST00000578735 73 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 SNX6P1-201ENST00000601728 1224 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC107304.1-201ENST00000604229 296 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AP002360.4-201ENST00000606980 481 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC022106.1-201ENST00000612834 766 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC129778.1-202ENST00000623812 261 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC017037.3-201ENST00000625016 472 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AL591379.1-207ENST00000635982 261 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 AC011815.2-201ENST00000618230 2021 ntBASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP1Q96SZ6 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 LYARP1-201ENST00000436977 1501 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 RNA5SP514-201ENST00000363717 111 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC004386.1-201ENST00000393214 761 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC245096.1-201ENST00000413104 546 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 DLGAP5P1-201ENST00000430307 464 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC005363.1-201ENST00000530779 351 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC090115.2-201ENST00000548060 883 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC007956.1-201ENST00000555623 542 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC090236.2-201ENST00000587933 1101 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC010503.3-201ENST00000594355 540 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms