Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC002075.1-201ENST00000457396 676 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RN7SL254P-201ENST00000460609 284 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RPS3AP15-201ENST00000483874 781 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RN7SL423P-201ENST00000486202 304 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AC105233.1-201ENST00000498840 781 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AC105384.2-201ENST00000508433 640 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AC090568.1-201ENST00000509499 856 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 OR51A1P-201ENST00000511110 946 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 Vault.2-201ENST00000516519 98 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 MTND2P38-201ENST00000522536 667 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 BTG1P1-201ENST00000540396 508 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 OR1E3-201ENST00000575608 948 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AC069431.2-201ENST00000604149 1099 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 HIRAP1-201ENST00000605318 787 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 MIR6721-201ENST00000617181 87 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 AC084824.4-201ENST00000620106 731 ntBASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4AQ8WYN0 SAMMSON-210ENST00000641260 1308 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 HSPD1P14-201ENST00000432666 1618 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 MIR16-2-201ENST00000362117 81 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 RNA5SP453-201ENST00000362503 119 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 SNORA51.9-201ENST00000384295 124 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 NIFKP3-201ENST00000417799 865 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AK3P5-201ENST00000432033 519 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 RNFT1P2-201ENST00000443064 757 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC093166.4-201ENST00000457867 318 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 RNU1-88P-201ENST00000459274 128 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 HMGB1P3-201ENST00000502802 616 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC093534.1-201ENST00000504977 132 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC112518.2-201ENST00000508565 425 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 IGLV3-30-201ENST00000524362 298 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 OR8Q1P-201ENST00000526467 655 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AP003066.2-201ENST00000529375 555 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 NPM1P5-201ENST00000557228 838 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC090666.1-201ENST00000578241 445 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC005479.3-201ENST00000602790 431 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC145423.1-201ENST00000605712 336 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC026741.1-201ENST00000605892 482 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AP005229.2-201ENST00000609980 697 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 MIR6809-201ENST00000612189 116 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC244100.4-201ENST00000617747 388 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AC005261.6-201ENST00000623072 1387 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AL161901.1-201ENST00000624954 3425 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG4AQ8WYN0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
ATG4AQ8WYN0 AL137058.3-201ENST00000624531 3099 ntBASIC6□□□□□ -1.45
ATG4AQ8WYN0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms