Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL645927.2-201ENST00000618350 349 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 FAM27E2-201ENST00000619668 403 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC018659.2-201ENST00000624690 715 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC073488.3-201ENST00000631611 778 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 FRG1EP-201ENST00000634469 770 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 BX649567.1-201ENST00000642071 1134 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC073365.1-203ENST00000641055 1992 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC016583.1-201ENST00000624221 2431 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 RNU6-906P-201ENST00000384700 70 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AL451046.1-201ENST00000406097 534 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 LIPT1P1-201ENST00000415870 1186 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 BX664727.1-201ENST00000416024 466 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC016027.5-201ENST00000427227 210 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC007679.3-201ENST00000434035 414 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AL731534.1-201ENST00000434711 269 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 OR10R1P-201ENST00000441524 1141 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC097463.1-201ENST00000447288 481 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC016027.4-201ENST00000450866 277 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 RN7SL352P-201ENST00000466002 277 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC128716.1-201ENST00000475129 166 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 CYP4F27P-201ENST00000514557 494 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 RNU6-491P-201ENST00000516099 110 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC006512.2-201ENST00000543250 486 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC027807.1-201ENST00000559921 996 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC007494.1-201ENST00000562293 760 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC009094.1-201ENST00000564443 426 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC016839.1-201ENST00000578162 867 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 AP001496.3-201ENST00000580230 913 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AL158042.1-201ENST00000605338 460 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 uc_338.26-201ENST00000612659 160 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 HULC.1-201ENST00000612720 240 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 AC104966.1-201ENST00000467010 1464 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VRK3Q8IV63 SAMMSON-210ENST00000641260 1308 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 MTND4P34-201ENST00000572715 1371 ntBASIC5.93□□□□□ -1.46
VRK3Q8IV63 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.93□□□□□ -1.46
VRK3Q8IV63 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 OR10R3P-201ENST00000361688 942 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms