Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL158152.1-201ENST00000602652 1435 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AC005042.1-201ENST00000393397 800 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 RPL11P3-201ENST00000395256 523 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 NACAP7-201ENST00000407371 609 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 RN7SKP59-201ENST00000410520 314 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AL121578.1-201ENST00000428051 892 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 OR6D1P-201ENST00000436165 939 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 SIAH1P1-201ENST00000479411 923 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AC015720.2-201ENST00000567709 334 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AC010245.2-201ENST00000606908 1167 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AP000864.1-201ENST00000609424 650 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AL118522.2-201ENST00000616045 615 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AC012078.1-201ENST00000405035 1646 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AL034546.1-201ENST00000623740 3693 ntBASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFWD3Q6PCD5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 RNU4-2-201ENST00000365668 141 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 RNU1-136P-201ENST00000384181 164 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC005522.1-201ENST00000395416 346 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 RNGTTP1-201ENST00000420965 728 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 REREP1Y-201ENST00000422655 198 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 REREP2Y-201ENST00000439103 200 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC007386.1-201ENST00000455212 582 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC100832.1-201ENST00000471945 383 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC108693.1-201ENST00000496068 432 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 IGKV2-18-201ENST00000522607 343 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC105036.1-201ENST00000566222 271 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 MIR3176-201ENST00000582210 90 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 AC012616.1-201ENST00000600294 197 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 MIR6133-201ENST00000617057 108 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RFWD3Q6PCD5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 AC002525.1-201ENST00000624392 1622 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 RNA5SP319-201ENST00000362768 119 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 RN7SKP162-201ENST00000363605 345 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 SNORA70.6-201ENST00000383934 134 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 AL009179.1-201ENST00000406085 265 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 RN7SKP279-201ENST00000411383 298 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 GTF3AP1-201ENST00000416942 1004 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 TMEM183AP1-205ENST00000432739 290 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 AC090638.1-201ENST00000498296 909 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 RN7SKP253-201ENST00000516424 309 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 SCARNA21.2-201ENST00000516600 166 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 AL359219.2-201ENST00000555184 348 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 AC007225.2-201ENST00000562529 256 ntBASIC5.74□□□□□ -1.49
RFWD3Q6PCD5 AP001542.1-201ENST00000591314 200 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms