Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 RPL21P91-201ENST00000429231 479 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 HMGB1P9-201ENST00000429856 646 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC109583.1-201ENST00000432156 268 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 SKP1P1-201ENST00000438081 489 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 RPL23AP16-201ENST00000441715 421 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 RN7SL12P-201ENST00000473849 290 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 RN7SL89P-201ENST00000480252 283 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 RNY4P37-201ENST00000516225 96 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 Y_RNA.721-201ENST00000517207 102 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC103855.4-201ENST00000533158 265 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 OR7E161P-201ENST00000533722 967 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 RN7SL25P-201ENST00000583862 260 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 RPL35AP25-201ENST00000584631 330 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AL590560.2-201ENST00000608430 732 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AL161734.1-201ENST00000609720 557 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 MIR6128-201ENST00000615528 109 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 uc_338.11-201ENST00000619132 160 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC024023.1-201ENST00000624530 922 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC009161.2-201ENST00000624626 138 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AL512643.1-201ENST00000635735 524 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AL445250.1-203ENST00000641829 1535 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC061975.5-201ENST00000584928 1441 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 RNU6-1115P-201ENST00000362490 106 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC074375.1-201ENST00000372993 192 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 NFIB-202ENST00000380924 840 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 Y_RNA.512-201ENST00000384518 102 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL360271.1-201ENST00000395679 510 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 FGFR1OP2P1-201ENST00000395943 500 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL136116.1-201ENST00000403591 381 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 MIR1252-201ENST00000408861 65 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 RN7SKP26-201ENST00000410247 293 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 RN7SKP139-201ENST00000410411 293 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 NANOGP6-201ENST00000429190 847 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL606752.1-201ENST00000435442 666 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL590664.1-201ENST00000448065 339 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC099563.1-201ENST00000456086 418 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 RN7SL740P-201ENST00000467060 344 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 SNRPD2P1-201ENST00000489253 354 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 EIF4EP3-201ENST00000498782 656 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 SNORA48.10-201ENST00000516965 160 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL355076.3-201ENST00000555838 587 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms