Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RN7SL656P-201ENST00000579044 281 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 RN7SL404P-201ENST00000582421 281 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 AL359091.2-201ENST00000609303 556 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 AC013476.2-201ENST00000614456 459 ntBASIC7.12□□□□□ -1.27
SOX4Q06945 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SOX4Q06945 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SOX4Q06945 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX4Q06945 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 CUL4AP1-201ENST00000514750 1863 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 AC110597.1-201ENST00000562669 3176 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
SOX4Q06945 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SOX4Q06945 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 MRPS6P2-201ENST00000381143 370 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC245036.1-201ENST00000391727 309 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 GSTA12P-201ENST00000402398 508 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX4Q06945 AKR1B10P1-201ENST00000425765 942 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 FTH1P10-202ENST00000430907 550 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 AL645939.3-201ENST00000435408 225 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SOX4Q06945 ELOCP10-201ENST00000440624 327 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC097359.1-201ENST00000447946 463 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX4Q06945 OR52E7P-201ENST00000452394 933 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC105918.1-201ENST00000474399 838 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC018645.1-201ENST00000505003 109 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 PRDX4P1-201ENST00000507189 574 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 RNA5SP473-201ENST00000516402 125 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AP001317.1-201ENST00000531194 960 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC006530.1-201ENST00000555980 571 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC121758.1-202ENST00000556917 658 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC244034.2-201ENST00000562504 509 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX4Q06945 SNORA59B-202ENST00000578183 701 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC011260.1-201ENST00000578420 472 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AL049840.5-201ENST00000602827 552 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 ELOCP34-201ENST00000604436 327 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC011891.2-201ENST00000604949 397 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC091946.2-201ENST00000606105 291 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC007742.2-201ENST00000618226 398 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 AC092447.7-201ENST00000422212 1621 ntBASIC7.11□□□□□ -1.27
SOX4Q06945 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX4Q06945 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms