Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 BX276092.6-201ENST00000430476 250 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC097463.1-201ENST00000447288 481 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 BX276092.8-201ENST00000455722 250 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AC104339.1-201ENST00000465478 348 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 ST13P12-201ENST00000508958 1094 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 RNU6-334P-201ENST00000517072 102 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CX3CL1P78423 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC084121.1-201ENST00000533882 835 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC104072.1-201ENST00000568817 668 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 MIR4433B-201ENST00000581329 102 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC119403.2-201ENST00000590960 598 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 BNIP3P27-201ENST00000599991 412 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AF230666.2-201ENST00000602328 725 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 MTATP6P2-201ENST00000603319 678 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 BNIP3P31-201ENST00000604515 566 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 MIR6780B-201ENST00000610307 79 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 MIR8084-201ENST00000614105 89 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AL591926.1-201ENST00000620542 217 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 AL596275.2-207ENST00000641188 675 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AC109446.4-201ENST00000623235 2755 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC138907.8-201ENST00000623981 2256 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CX3CL1P78423 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 GAPDHP15-201ENST00000398586 975 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CL1P78423 AL355143.1-201ENST00000407101 841 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 RNU4-27P-201ENST00000410889 139 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AL512637.2-201ENST00000431287 1256 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 USP24P1-201ENST00000433802 779 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CL1P78423 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CL1P78423 MOB1AP2-201ENST00000446060 614 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AL162739.1-201ENST00000450606 307 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC009963.3-201ENST00000458090 486 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC116562.1-201ENST00000485355 781 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC012123.2-201ENST00000485809 248 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC026782.2-201ENST00000510845 636 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CL1P78423 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CL1P78423 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CL1P78423 AC068339.2-201ENST00000534395 618 ntBASIC4.78□□□□□ -1.64
CX3CL1P78423 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.78□□□□□ -1.64
CX3CL1P78423 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms