Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 AP001357.1-201ENST00000586304 1053 ntBASIC5.61□□□□□ -1.51
RAE1P78406 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
RAE1P78406 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.61□□□□□ -1.51
RAE1P78406 MTCO2P22-201ENST00000603246 681 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AC048344.4-201ENST00000619744 527 ntBASIC5.61□□□□□ -1.51
RAE1P78406 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
RAE1P78406 AL356863.1-201ENST00000623378 1080 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AC137056.2-201ENST00000624055 1958 ntBASIC5.61□□□□□ -1.51
RAE1P78406 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RAE1P78406 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.61□□□□□ -1.51
RAE1P78406 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RAE1P78406 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RAE1P78406 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 MFSD8-239ENST00000641590 2479 ntBASIC5.6□□□□□ -1.51
RAE1P78406 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.6□□□□□ -1.51
RAE1P78406 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 MTND5P11-201ENST00000511037 1812 ntBASIC5.6□□□□□ -1.51
RAE1P78406 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 HSPD1P7-201ENST00000447985 1686 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 AC090181.3-201ENST00000624777 1514 ntBASIC5.6□□□□□ -1.51
RAE1P78406 OFD1P17-201ENST00000437639 3018 ntBASIC5.6□□□□□ -1.51
RAE1P78406 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 FBXL21-201ENST00000297158 1305 ntBASIC5.6□□□□□ -1.51
RAE1P78406 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 U3.10-201ENST00000364459 214 ntBASIC5.6□□□□□ -1.51
RAE1P78406 RN7SKP78-201ENST00000364711 318 ntBASIC5.6□□□□□ -1.51
RAE1P78406 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 RNU6-796P-201ENST00000391086 107 ntBASIC5.6□□□□□ -1.51
RAE1P78406 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 OR2W4P-201ENST00000406496 926 ntBASIC5.6□□□□□ -1.51
RAE1P78406 CBX1P3-201ENST00000413296 527 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AL158825.1-201ENST00000414735 521 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 RPL6P5-201ENST00000445678 828 ntBASIC5.6□□□□□ -1.51
RAE1P78406 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 RPL12P39-201ENST00000455456 496 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AC079080.1-201ENST00000479841 822 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AC006539.1-201ENST00000481419 501 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AC021006.1-201ENST00000489849 553 ntBASIC5.6□□□□□ -1.51
RAE1P78406 HMGB1P38-201ENST00000490557 577 ntBASIC5.6□□□□□ -1.51
RAE1P78406 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 AC023825.1-201ENST00000566704 1030 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.6□□□□□ -1.51
RAE1P78406 MIR4502-201ENST00000580432 81 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RAE1P78406 OR7A19P-201ENST00000608051 733 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AC092266.1-201ENST00000610958 165 ntBASIC5.6□□□□□ -1.51
RAE1P78406 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 CYCSP41-201ENST00000616920 296 ntBASIC5.6□□□□□ -1.51
RAE1P78406 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 OR11H2-202ENST00000641517 1085 ntBASIC5.6□□□□□ -1.51
RAE1P78406 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.6□□□□□ -1.51
RAE1P78406 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.6□□□□□ -1.51
RAE1P78406 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RAE1P78406 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAE1P78406 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.59□□□□□ -1.51
RAE1P78406 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.59□□□□□ -1.51
RAE1P78406 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 AC027279.4-201ENST00000624371 2072 ntBASIC5.59□□□□□ -1.51
RAE1P78406 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 SEPT7P7-201ENST00000420492 1301 ntBASIC5.59□□□□□ -1.51
RAE1P78406 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAE1P78406 RNA5SP232-201ENST00000364144 119 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms