Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AGGF1P7-201ENST00000562369 913 ntBASIC4.81□□□□□ -1.64
ACTBP60709 AC002310.3-201ENST00000569728 723 ntBASIC4.81□□□□□ -1.64
ACTBP60709 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTBP60709 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.81□□□□□ -1.64
ACTBP60709 AC068768.2-201ENST00000602352 343 ntBASIC4.81□□□□□ -1.64
ACTBP60709 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 CR382285.2-201ENST00000624662 1495 ntBASIC4.81□□□□□ -1.64
ACTBP60709 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.81□□□□□ -1.64
ACTBP60709 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
ACTBP60709 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 RNU1-65P-201ENST00000363919 148 ntBASIC4.8□□□□□ -1.64
ACTBP60709 SNORA51.9-201ENST00000384295 124 ntBASIC4.8□□□□□ -1.64
ACTBP60709 SNORD56.6-201ENST00000384569 71 ntBASIC4.8□□□□□ -1.64
ACTBP60709 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.8□□□□□ -1.64
ACTBP60709 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 SNRPFP2-201ENST00000440710 251 ntBASIC4.8□□□□□ -1.64
ACTBP60709 AC016772.1-201ENST00000444170 1261 ntBASIC4.8□□□□□ -1.64
ACTBP60709 RN7SL515P-201ENST00000463999 297 ntBASIC4.8□□□□□ -1.64
ACTBP60709 RN7SL741P-201ENST00000482473 289 ntBASIC4.8□□□□□ -1.64
ACTBP60709 AL158068.1-201ENST00000506116 616 ntBASIC4.8□□□□□ -1.64
ACTBP60709 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.8□□□□□ -1.64
ACTBP60709 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 RN7SKP35-201ENST00000517210 151 ntBASIC4.8□□□□□ -1.64
ACTBP60709 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 OR5AM1P-201ENST00000532136 1032 ntBASIC4.8□□□□□ -1.64
ACTBP60709 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 SETP1-201ENST00000556014 845 ntBASIC4.8□□□□□ -1.64
ACTBP60709 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 AC091167.5-201ENST00000605689 894 ntBASIC4.8□□□□□ -1.64
ACTBP60709 MIR6780B-201ENST00000610307 79 ntBASIC4.8□□□□□ -1.64
ACTBP60709 AC092266.1-201ENST00000610958 165 ntBASIC4.8□□□□□ -1.64
ACTBP60709 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
ACTBP60709 AL591926.1-201ENST00000620542 217 ntBASIC4.8□□□□□ -1.64
ACTBP60709 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.8□□□□□ -1.64
ACTBP60709 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.8□□□□□ -1.64
ACTBP60709 AC104966.1-201ENST00000467010 1464 ntBASIC4.8□□□□□ -1.64
ACTBP60709 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
ACTBP60709 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ACTBP60709 AC093225.1-201ENST00000506867 1408 ntBASIC4.8□□□□□ -1.64
ACTBP60709 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ACTBP60709 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 AC022417.1-201ENST00000624768 1303 ntBASIC4.79□□□□□ -1.64
ACTBP60709 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.79□□□□□ -1.64
ACTBP60709 MIR130B-202ENST00000385018 82 ntBASIC4.79□□□□□ -1.64
ACTBP60709 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ACTBP60709 AC099535.1-201ENST00000408928 371 ntBASIC4.79□□□□□ -1.64
ACTBP60709 SETP15-201ENST00000412724 337 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AL356968.2-201ENST00000412769 1257 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTBP60709 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.79□□□□□ -1.64
ACTBP60709 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTBP60709 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.79□□□□□ -1.64
ACTBP60709 RPL7P56-201ENST00000429441 717 ntBASIC4.79□□□□□ -1.64
ACTBP60709 RPL7AP49-201ENST00000429522 581 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AL591438.1-201ENST00000433508 581 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTBP60709 PNKDP1-201ENST00000435914 430 ntBASIC4.79□□□□□ -1.64
ACTBP60709 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTBP60709 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms