Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DSTNP5-201ENST00000427921 523 ntBASIC5.52□□□□□ -1.53
CDH13P55290 BX323845.3-201ENST00000428215 527 ntBASIC5.52□□□□□ -1.53
CDH13P55290 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 TMEM183AP1-205ENST00000432739 290 ntBASIC5.52□□□□□ -1.53
CDH13P55290 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH13P55290 AC093166.3-201ENST00000448785 303 ntBASIC5.52□□□□□ -1.53
CDH13P55290 CCRL1P1-201ENST00000449542 1053 ntBASIC5.52□□□□□ -1.53
CDH13P55290 MTND6P32-201ENST00000457611 483 ntBASIC5.52□□□□□ -1.53
CDH13P55290 SNORD125-201ENST00000459538 96 ntBASIC5.52□□□□□ -1.53
CDH13P55290 RPSAP37-201ENST00000470913 821 ntBASIC5.52□□□□□ -1.53
CDH13P55290 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH13P55290 AC009120.1-201ENST00000493458 473 ntBASIC5.52□□□□□ -1.53
CDH13P55290 AC092349.1-201ENST00000504903 310 ntBASIC5.52□□□□□ -1.53
CDH13P55290 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH13P55290 RN7SKP253-201ENST00000516424 309 ntBASIC5.52□□□□□ -1.53
CDH13P55290 AC021678.3-201ENST00000517893 476 ntBASIC5.52□□□□□ -1.53
CDH13P55290 MTND2P7-201ENST00000521337 640 ntBASIC5.52□□□□□ -1.53
CDH13P55290 BCAS2P1-201ENST00000528022 632 ntBASIC5.52□□□□□ -1.53
CDH13P55290 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH13P55290 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH13P55290 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 MIR4260-201ENST00000583107 67 ntBASIC5.52□□□□□ -1.53
CDH13P55290 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH13P55290 HMGB1P51-201ENST00000605166 638 ntBASIC5.52□□□□□ -1.53
CDH13P55290 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.52□□□□□ -1.53
CDH13P55290 AC048341.3-201ENST00000619323 491 ntBASIC5.52□□□□□ -1.53
CDH13P55290 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH13P55290 OR4F13P-202ENST00000560066 2054 ntBASIC5.52□□□□□ -1.53
CDH13P55290 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH13P55290 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH13P55290 PWAR1-201ENST00000624188 2414 ntBASIC5.52□□□□□ -1.53
CDH13P55290 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH13P55290 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CDH13P55290 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CDH13P55290 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 RN7SKP145-201ENST00000363291 303 ntBASIC5.51□□□□□ -1.53
CDH13P55290 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 SNORA70.6-201ENST00000383934 134 ntBASIC5.51□□□□□ -1.53
CDH13P55290 SNORA5.1-201ENST00000384275 131 ntBASIC5.51□□□□□ -1.53
CDH13P55290 RNA5SP431-201ENST00000410312 120 ntBASIC5.51□□□□□ -1.53
CDH13P55290 AL133482.1-201ENST00000415988 498 ntBASIC5.51□□□□□ -1.53
CDH13P55290 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH13P55290 CYCSP51-201ENST00000443545 318 ntBASIC5.51□□□□□ -1.53
CDH13P55290 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH13P55290 RN7SL570P-201ENST00000484405 292 ntBASIC5.51□□□□□ -1.53
CDH13P55290 RPL9P15-201ENST00000491096 532 ntBASIC5.51□□□□□ -1.53
CDH13P55290 NPM1P28-201ENST00000492269 840 ntBASIC5.51□□□□□ -1.53
CDH13P55290 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH13P55290 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH13P55290 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH13P55290 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 Y_RNA.667-201ENST00000516212 107 ntBASIC5.51□□□□□ -1.53
CDH13P55290 IGLV3-24-201ENST00000517477 197 ntBASIC5.51□□□□□ -1.53
CDH13P55290 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH13P55290 OR10D4P-201ENST00000525892 951 ntBASIC5.51□□□□□ -1.53
CDH13P55290 HMGN2P36-201ENST00000529541 409 ntBASIC5.51□□□□□ -1.53
CDH13P55290 OR4A43P-201ENST00000532938 908 ntBASIC5.51□□□□□ -1.53
CDH13P55290 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH13P55290 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH13P55290 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH13P55290 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH13P55290 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 COX6CP7-201ENST00000597056 208 ntBASIC5.51□□□□□ -1.53
CDH13P55290 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 AC007620.3-201ENST00000608131 497 ntBASIC5.51□□□□□ -1.53
CDH13P55290 AC007786.3-201ENST00000615154 596 ntBASIC5.51□□□□□ -1.53
CDH13P55290 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 AL162233.1-201ENST00000620014 944 ntBASIC5.51□□□□□ -1.53
CDH13P55290 MIR6806-201ENST00000622141 64 ntBASIC5.51□□□□□ -1.53
CDH13P55290 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH13P55290 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH13P55290 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH13P55290 AC007842.1-201ENST00000597336 2039 ntBASIC5.5□□□□□ -1.53
CDH13P55290 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH13P55290 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms