Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 RN7SKP114-201ENST00000410327 279 ntBASIC5.65□□□□□ -1.5
BRCA2P51587 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCA2P51587 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.65□□□□□ -1.5
BRCA2P51587 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCA2P51587 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BRCA2P51587 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.65□□□□□ -1.5
BRCA2P51587 AP003400.3-201ENST00000624904 346 ntBASIC5.65□□□□□ -1.5
BRCA2P51587 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.65□□□□□ -1.5
BRCA2P51587 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC5.65□□□□□ -1.5
BRCA2P51587 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.65□□□□□ -1.5
BRCA2P51587 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BRCA2P51587 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.65□□□□□ -1.5
BRCA2P51587 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.65□□□□□ -1.5
BRCA2P51587 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.65□□□□□ -1.5
BRCA2P51587 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.65□□□□□ -1.5
BRCA2P51587 RPL12P43-201ENST00000420608 499 ntBASIC5.65□□□□□ -1.5
BRCA2P51587 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 USP24P1-201ENST00000433802 779 ntBASIC5.65□□□□□ -1.5
BRCA2P51587 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCA2P51587 SNORA59A-201ENST00000459326 152 ntBASIC5.65□□□□□ -1.5
BRCA2P51587 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.65□□□□□ -1.5
BRCA2P51587 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.65□□□□□ -1.5
BRCA2P51587 AC122688.1-201ENST00000541494 223 ntBASIC5.65□□□□□ -1.5
BRCA2P51587 AC013731.1-201ENST00000604340 883 ntBASIC5.65□□□□□ -1.5
BRCA2P51587 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRCA2P51587 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC5.65□□□□□ -1.5
BRCA2P51587 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
BRCA2P51587 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
BRCA2P51587 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BRCA2P51587 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
BRCA2P51587 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
BRCA2P51587 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
BRCA2P51587 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.65□□□□□ -1.51
BRCA2P51587 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRCA2P51587 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRCA2P51587 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.65□□□□□ -1.51
BRCA2P51587 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
BRCA2P51587 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.65□□□□□ -1.51
BRCA2P51587 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
BRCA2P51587 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.65□□□□□ -1.51
BRCA2P51587 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.65□□□□□ -1.51
BRCA2P51587 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BRCA2P51587 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
BRCA2P51587 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
BRCA2P51587 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC5.64□□□□□ -1.51
BRCA2P51587 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
BRCA2P51587 RN7SKP280-201ENST00000364196 304 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 CYCSP11-201ENST00000436426 315 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.64□□□□□ -1.51
BRCA2P51587 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCA2P51587 NIFKP7-201ENST00000503365 834 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 AL591034.3-201ENST00000605511 685 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
BRCA2P51587 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
BRCA2P51587 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
BRCA2P51587 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.64□□□□□ -1.51
BRCA2P51587 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 RPL36AP36-201ENST00000418616 301 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 FHP1-201ENST00000442741 703 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 PHBP16-201ENST00000446318 950 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCA2P51587 AC243756.2-201ENST00000618406 463 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
BRCA2P51587 MAPK10-304ENST00000641341 3984 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.64□□□□□ -1.51
BRCA2P51587 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
BRCA2P51587 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
BRCA2P51587 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCA2P51587 HSPA8P15-201ENST00000401676 786 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCA2P51587 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
BRCA2P51587 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCA2P51587 RPL23AP56-201ENST00000460778 453 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 AC092754.1-201ENST00000472975 479 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 RNU1-45P-201ENST00000517191 141 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 AC021106.3-201ENST00000623925 531 ntBASIC5.64□□□□□ -1.51
BRCA2P51587 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC5.63□□□□□ -1.51
BRCA2P51587 AP005432.1-201ENST00000580891 3485 ntBASIC5.63□□□□□ -1.51
BRCA2P51587 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC5.63□□□□□ -1.51
BRCA2P51587 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
BRCA2P51587 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCA2P51587 RNA5SP317-201ENST00000410176 116 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms