Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.21□□□□□ -1.26
RNF144AP50876 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF144AP50876 AC136443.5-201ENST00000603741 370 ntBASIC7.21□□□□□ -1.26
RNF144AP50876 RN7SL840P-201ENST00000606883 284 ntBASIC7.21□□□□□ -1.26
RNF144AP50876 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF144AP50876 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.21□□□□□ -1.26
RNF144AP50876 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF144AP50876 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF144AP50876 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF144AP50876 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF144AP50876 AL451064.2-201ENST00000623514 1654 ntBASIC7.21□□□□□ -1.26
RNF144AP50876 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RNF144AP50876 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RNF144AP50876 AL355974.1-201ENST00000618896 1708 ntBASIC7.21□□□□□ -1.26
RNF144AP50876 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF144AP50876 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF144AP50876 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
RNF144AP50876 AC110716.2-201ENST00000563865 3945 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC106800.1-201ENST00000501221 1362 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 COL6A4P1-202ENST00000487147 4317 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 ZNF733P-202ENST00000444809 1573 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF144AP50876 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 Z99129.4-201ENST00000624649 2435 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF144AP50876 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
RNF144AP50876 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 AC010928.1-201ENST00000592477 1447 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 AC090643.1-201ENST00000623600 3100 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF144AP50876 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 RNU1-47P-201ENST00000362966 163 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 RNY3P3-201ENST00000363816 102 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 RNU1-11P-201ENST00000383975 164 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 MIR16-1-201ENST00000385271 89 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AL359704.1-201ENST00000411586 781 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 AL592293.2-201ENST00000422292 996 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 EIF1P3-201ENST00000423841 334 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.2□□□□□ -1.26
RNF144AP50876 GTF2IP20-201ENST00000431663 360 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 AC009961.2-201ENST00000435771 251 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 MRPL50P4-201ENST00000446432 475 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 FTH1P7-201ENST00000450676 552 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.2□□□□□ -1.26
RNF144AP50876 C1DP4-201ENST00000455429 424 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AL590639.1-201ENST00000456484 337 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC091564.1-201ENST00000464563 479 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC112206.1-201ENST00000468416 477 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 AC106800.2-201ENST00000514009 1103 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 MTND5P4-201ENST00000514978 288 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 RN7SKP13-201ENST00000515933 244 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AP005902.2-201ENST00000518393 307 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 IGLVI-70-201ENST00000523272 390 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 AP001189.2-201ENST00000527320 189 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
RNF144AP50876 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF144AP50876 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF144AP50876 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF144AP50876 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 UBE2CP1-201ENST00000557130 554 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 MRPL45P2-203ENST00000573318 473 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 AC068802.1-201ENST00000603420 732 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC124303.1-201ENST00000605703 360 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 RMST_3.1-201ENST00000611651 109 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 AC090971.5-201ENST00000621102 293 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 AL078596.1-201ENST00000624856 447 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
RNF144AP50876 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 AL513523.1-201ENST00000417868 1309 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 GDI2P1-201ENST00000429312 1336 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms