Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC125336.1-201ENST00000508893 2827 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN9P43378 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 AC015689.2-201ENST00000528172 1738 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN9P43378 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
PTPN9P43378 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN9P43378 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN9P43378 SNORA64.1-201ENST00000362600 132 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PTPN9P43378 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN9P43378 AL357078.2-201ENST00000416486 427 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN9P43378 ARAFP1-201ENST00000422172 605 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN9P43378 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN9P43378 HMGB3P24-201ENST00000433260 622 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN9P43378 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN9P43378 ARL5AP3-201ENST00000439327 386 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 RPL5P10-201ENST00000445207 894 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 VN1R48P-201ENST00000448149 1036 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AL445665.1-202ENST00000452436 324 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN9P43378 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.94□□□□□ -1.46
PTPN9P43378 AC094085.1-201ENST00000468914 584 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
PTPN9P43378 GAPDHP62-201ENST00000515313 990 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AC079600.1-201ENST00000550326 297 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN9P43378 HSPE1P2-201ENST00000554777 306 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN9P43378 AC015802.2-201ENST00000589690 189 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AC025857.2-201ENST00000602711 238 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AC135803.1-201ENST00000608748 565 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN9P43378 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 AC007842.1-201ENST00000597336 2039 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 AC011933.2-201ENST00000578539 2790 ntBASIC5.94□□□□□ -1.46
PTPN9P43378 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN9P43378 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN9P43378 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN9P43378 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTPN9P43378 NAMPTP1-201ENST00000440465 2514 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC106872.5-201ENST00000508856 1416 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN9P43378 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
PTPN9P43378 RNU11-201ENST00000387069 134 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 AC087752.1-201ENST00000391360 558 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 OR10T1P-201ENST00000424327 947 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 SEC63P1-201ENST00000425785 1258 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 NPM1P26-201ENST00000426339 738 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN9P43378 AL691517.1-201ENST00000440833 1235 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 SNORD125-201ENST00000459538 96 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 HMGB1P42-201ENST00000532126 553 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN9P43378 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN9P43378 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 AL360012.1-201ENST00000602813 131 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 AL671309.1-201ENST00000603750 544 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 AC015712.7-201ENST00000615211 635 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 AP005431.1-201ENST00000618479 319 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 AC074276.2-201ENST00000619891 348 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN9P43378 AC087565.3-203ENST00000641018 837 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 AC079776.5-201ENST00000641920 211 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 OR13C1P-202ENST00000641378 2919 ntBASIC5.93□□□□□ -1.46
PTPN9P43378 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 1814.8 ms