Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 MAPK10-328ENST00000641553 4009 ntBASIC5.27□□□□□ -1.57
SOX3P41225 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SOX3P41225 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX3P41225 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
SOX3P41225 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 SNORA70.6-201ENST00000383934 134 ntBASIC5.27□□□□□ -1.57
SOX3P41225 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SOX3P41225 MTND3P20-201ENST00000407663 186 ntBASIC5.27□□□□□ -1.57
SOX3P41225 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 XKRYP6-201ENST00000440468 1116 ntBASIC5.27□□□□□ -1.57
SOX3P41225 XKRYP3-201ENST00000442113 1116 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AC005297.1-201ENST00000444765 862 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX3P41225 RPS27AP2-201ENST00000457576 465 ntBASIC5.27□□□□□ -1.57
SOX3P41225 RNU7-157P-201ENST00000459600 66 ntBASIC5.27□□□□□ -1.57
SOX3P41225 RPSAP39-201ENST00000467439 883 ntBASIC5.27□□□□□ -1.57
SOX3P41225 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX3P41225 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX3P41225 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 AC105420.1-201ENST00000504389 582 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX3P41225 AC138866.2-201ENST00000508650 584 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AC074255.1-201ENST00000511259 501 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.27□□□□□ -1.57
SOX3P41225 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX3P41225 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 AC025423.2-201ENST00000537570 439 ntBASIC5.27□□□□□ -1.57
SOX3P41225 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.27□□□□□ -1.57
SOX3P41225 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.27□□□□□ -1.57
SOX3P41225 AL163952.1-202ENST00000569625 600 ntBASIC5.27□□□□□ -1.57
SOX3P41225 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 RN7SL753P-201ENST00000581238 290 ntBASIC5.27□□□□□ -1.57
SOX3P41225 MIR4505-201ENST00000582238 73 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX3P41225 AC063977.5-201ENST00000601044 974 ntBASIC5.27□□□□□ -1.57
SOX3P41225 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX3P41225 AL021368.1-201ENST00000607490 540 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AC007786.3-201ENST00000615154 596 ntBASIC5.27□□□□□ -1.57
SOX3P41225 AL353684.1-201ENST00000622677 1120 ntBASIC5.27□□□□□ -1.57
SOX3P41225 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SOX3P41225 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SOX3P41225 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SOX3P41225 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX3P41225 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX3P41225 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX3P41225 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX3P41225 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.26□□□□□ -1.57
SOX3P41225 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
SOX3P41225 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX3P41225 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.26□□□□□ -1.57
SOX3P41225 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SOX3P41225 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX3P41225 MIR130A-201ENST00000385274 89 ntBASIC5.26□□□□□ -1.57
SOX3P41225 RN7SKP279-201ENST00000411383 298 ntBASIC5.26□□□□□ -1.57
SOX3P41225 RN7SKP293-201ENST00000411389 296 ntBASIC5.26□□□□□ -1.57
SOX3P41225 BMS1P17-202ENST00000416720 316 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AL513325.1-201ENST00000417716 1034 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX3P41225 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.26□□□□□ -1.57
SOX3P41225 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX3P41225 RN7SL72P-201ENST00000460697 269 ntBASIC5.26□□□□□ -1.57
SOX3P41225 HMGN1P8-201ENST00000463578 288 ntBASIC5.26□□□□□ -1.57
SOX3P41225 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SOX3P41225 AC087672.1-201ENST00000479876 766 ntBASIC5.26□□□□□ -1.57
SOX3P41225 RPS3AP15-201ENST00000483874 781 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AC073610.1-201ENST00000489971 396 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.26□□□□□ -1.57
SOX3P41225 AP000619.2-201ENST00000546014 969 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.26□□□□□ -1.57
SOX3P41225 AC011270.1-201ENST00000558606 583 ntBASIC5.26□□□□□ -1.57
SOX3P41225 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX3P41225 AC067805.1-201ENST00000559344 470 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX3P41225 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.26□□□□□ -1.57
SOX3P41225 AC027216.1-201ENST00000577726 685 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX3P41225 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX3P41225 AC012467.1-201ENST00000607740 256 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AC090607.5-201ENST00000615692 224 ntBASIC5.26□□□□□ -1.57
SOX3P41225 AC104964.3-201ENST00000606115 2860 ntBASIC5.26□□□□□ -1.57
SOX3P41225 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX3P41225 AC009962.1-201ENST00000567327 3813 ntBASIC5.26□□□□□ -1.57
SOX3P41225 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX3P41225 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX3P41225 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX3P41225 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX3P41225 AC114786.1-201ENST00000512892 1415 ntBASIC5.25□□□□□ -1.57
SOX3P41225 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms