Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC079315.1-201ENST00000602952 623 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 AC008833.1-201ENST00000611633 691 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 MIR6071-201ENST00000616741 78 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 MIR193BHG-214ENST00000641765 509 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FDFT1P37268 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 YES1P1-201ENST00000418510 1628 ntBASIC5.59□□□□□ -1.52
FDFT1P37268 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
FDFT1P37268 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
FDFT1P37268 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
FDFT1P37268 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.59□□□□□ -1.52
FDFT1P37268 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.59□□□□□ -1.52
FDFT1P37268 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
FDFT1P37268 OR13C1P-202ENST00000641378 2919 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AC114786.1-201ENST00000512892 1415 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.58□□□□□ -1.52
FDFT1P37268 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
FDFT1P37268 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.58□□□□□ -1.52
FDFT1P37268 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.58□□□□□ -1.52
FDFT1P37268 SNORA48.4-201ENST00000391089 134 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 RN7SKP240-201ENST00000410583 375 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 RNU6-233P-201ENST00000410845 141 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.58□□□□□ -1.52
FDFT1P37268 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 AL133173.1-201ENST00000423458 397 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.58□□□□□ -1.52
FDFT1P37268 AKR1B10P1-201ENST00000425765 942 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AC115283.1-201ENST00000427353 400 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.58□□□□□ -1.52
FDFT1P37268 RPL7AP49-201ENST00000429522 581 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AL591438.1-201ENST00000433508 581 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 DNAJA1P5-201ENST00000440278 943 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.58□□□□□ -1.52
FDFT1P37268 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 LDHBP2-201ENST00000456969 1005 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 EIF3LP3-201ENST00000495197 822 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.58□□□□□ -1.52
FDFT1P37268 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 BCAS2P1-201ENST00000528022 632 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.58□□□□□ -1.52
FDFT1P37268 AC134669.1-201ENST00000581275 672 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.58□□□□□ -1.52
FDFT1P37268 RNU6-84P-201ENST00000607737 102 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.58□□□□□ -1.52
FDFT1P37268 AL096712.1-201ENST00000614561 159 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AP005431.1-201ENST00000618479 319 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 DDX18P6-201ENST00000450119 1997 ntBASIC5.58□□□□□ -1.52
FDFT1P37268 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FDFT1P37268 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.58□□□□□ -1.52
FDFT1P37268 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
FDFT1P37268 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.57□□□□□ -1.52
FDFT1P37268 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
FDFT1P37268 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.57□□□□□ -1.52
FDFT1P37268 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
FDFT1P37268 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FDFT1P37268 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
FDFT1P37268 U3.7-201ENST00000363668 216 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 RNA5SP241-201ENST00000391326 114 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.57□□□□□ -1.52
FDFT1P37268 HMGN1P20-201ENST00000411849 300 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 EEF1B2P8-201ENST00000414101 671 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.57□□□□□ -1.52
FDFT1P37268 AC093155.2-201ENST00000420734 937 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.57□□□□□ -1.52
FDFT1P37268 RPL34P3-201ENST00000421454 338 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.57□□□□□ -1.52
FDFT1P37268 AC017019.1-201ENST00000426129 261 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 RPL12P17-201ENST00000432393 498 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
FDFT1P37268 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.57□□□□□ -1.52
FDFT1P37268 Z84478.1-201ENST00000438230 1219 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.57□□□□□ -1.52
FDFT1P37268 AL161722.1-201ENST00000446972 1032 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.57□□□□□ -1.52
FDFT1P37268 AL450023.1-201ENST00000450868 751 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 SUMO2P4-201ENST00000504193 276 ntBASIC5.57□□□□□ -1.52
FDFT1P37268 AC109464.1-201ENST00000511091 819 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms